KEGG   Saccharomyces eubayanus: DI49_1223
Entry
DI49_1223         CDS       T08138                                 
Name
(RefSeq) TAF5-like protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
seub  Saccharomyces eubayanus
Pathway
seub03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DI49_1223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:seub03021]
    DI49_1223
   03036 Chromosome and associated proteins [BR:seub03036]
    DI49_1223
Transcription machinery [BR:seub03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     DI49_1223
   Coactivators
    SAGA/TFTC/STAGA complex
     DI49_1223
Chromosome and associated proteins [BR:seub03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     DI49_1223
    STAGA complex
     DI49_1223
    TFTC complex
     DI49_1223
    SAGA complex
     DI49_1223
    SLIK complex
     DI49_1223
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_THOC3 TFIID_NTD2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_Gbeta WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_EIPR1 LisH WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_Nup120_160 PROPPIN Beta-prop_Vps41 Beta-prop_IP5PC_F PEP5_VPS11_N Nucleoporin_N LisH_WDR26 Tricorn_2nd LisH_PAC1 Cytochrom_D1 WDR54 LisH_TPL
Other DBs
NCBI-GeneID: 28930360
NCBI-ProteinID: XP_018223228
LinkDB
Position
IV:complement(<786958..>789360)
AA seq 800 aa
MSQKQGTNQNQNGAHQPQPAKNQRSNNAAGANSAQPPQQQSQGQSQQQGKSNGPFSASDL
NRIVLEYLNKKGYHRTEAMLRAESGRTLTPQNKPANTKTGKFPEQSVAPPNPGKTAKPIS
NPTSLSSKRDAEGGIVSNERLEGFNAPENYIRAYSMLKNWVDSSLEIYKPELSYIMYPIF
IYLFLNLVAKNPVYARRFFDRFSPDFKDFHGSEINRLFSVNSIDHIEENEVASAFQSHRY
RITMSKTTLNLLLYFLNENESVGGSLIISVINQHLDPNIVESVTAREKLADGIKVLSDGE
NGNGKQNLEMNSVPVKLGPFPKDEEFVKEIETELKIKDDQEKQQNQQTSDENNSEANSRT
LLQEYKAMNNEGFEEYAGEEDKDKVKEKTAKDEEKKEIELKVDDKKTDSNLYSPARDILP
LPPKTALDLKLEIQKVKESRDAIKLDNLQLALPSVCMYTFQNTNKDMSCLDFSDDCRIAA
AGFQDSYIKIWSLDGSSLNNPNIMPNNNNSEHRDTDDPTCKTLVGHSGTVYATSFSPDNK
YLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVNFSPLGHYFATASHDQTARLWSCDH
IYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVICIA
VSPDGRWLSTGSEDGIINIWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHSV
RVWDLKKATTEPSAEPDEPFIGYLGDVTASINQDIKEYGRRRTVIPTSDLVASFYTKKTP
VFKVKFSRSNLALAGGAFRP
NT seq 2403 nt   +upstreamnt  +downstreamnt
atgtcacagaagcaaggtacgaatcagaaccagaatggtgctcaccagccacagcccgcg
aagaaccagcgatctaataatgccgctggcgctaattccgcgcaaccgccacaacagcag
agccaaggccagtcccagcagcaggggaaatccaatggcccgttttctgcctccgactta
aatagaattgttttggaatatttgaataaaaagggataccaccgcacagaggcaatgctg
agagccgagagtggacgtacgttaacacctcagaacaagccagcaaacactaaaacgggg
aaatttcctgaacaatcggtagcccctccaaacccgggaaagactgccaagcccataagt
aatccaacaagtttatcatccaagagagatgcagaaggtgggatcgtctccaatgaacgg
ctggaagggttcaatgcgcccgagaactacataagggcatactcaatgttgaaaaactgg
gtggattcatctttggaaatttacaagccggaactgagctacatcatgtatccaatattc
atttatttattcttaaatttagtggcaaagaatcccgtgtatgcccgtcgtttttttgac
agattttctccagactttaaggatttccatggttcagaaatcaacagactctttagtgtt
aattctatagatcacatcgaggaaaatgaagtggctagcgcgttccaatcccataggtat
agaatcaccatgtctaaaaccaccttaaatcttctcttgtattttctaaatgaaaacgag
agtgtaggagggtcattaataatcagtgtcataaatcaacatctggacccgaatatcgtg
gaatctgtaactgcaagggaaaagttggccgacggtataaaagttctcagtgatggtgaa
aacgggaatgggaaacaaaacctagaaatgaattctgttcctgtcaagctgggacctttc
cccaaagatgaagaattcgtaaaagaaatcgaaacagaattgaagattaaggatgatcaa
gagaaacaacaaaatcaacaaacctcggatgaaaataattccgaggcaaacagtaggact
ttattgcaagaatataaagccatgaataacgaaggatttgaagaatacgctggcgaagag
gataaagataaagttaaagagaaaaccgccaaagacgaggagaagaaggaaattgagttg
aaagtggacgataagaaaacagacagcaatttatattctcctgcaagagatatattacct
ctgcctccaaagacggcattagatttaaaactggagatccaaaaggtcaaagaatcccgt
gacgctatcaaattagataatctgcaattggcattgcccagtgtatgcatgtacaccttt
caaaatacaaataaggacatgtcatgtttagatttcagtgatgattgtagaatagcagcc
gccgggttccaagacagttacatcaagatctggtcacttgatggttcatctttaaacaat
cctaacatcatgccgaacaataacaatagcgaacacagggatactgatgatccaacttgt
aaaaccctagtcgggcatagcgggacagtgtatgccacgagtttcagtcccgataataaa
tacttgctttcaggttccgaagacaaaaccgtcaggctatggtccatggacacacacact
gcattagtaagttacaaaggccacaatcatcccgtttgggacgttaacttctctccgttg
ggccactatttcgccactgcgtcgcacgaccaaaccgcacggctatggtcatgtgatcac
atatacccattaagaatatttgctggacatttaaatgatgttgactgtgtgtcattccat
ccaaatggttgttatgtatttaccgggtccagtgacaagacgtgtagaatgtgggacgtc
tccacgggtgactcggtcagattatttttgggccatactgcacctgtcatctgtatcgcc
gtttctccggatggcaggtggctatctacgggtagcgaagatggtattataaacatatgg
gacattggcacaggtaaaaggctgaagcaaatgcgtggacacggtaagaacgccatatat
tctctgtcttacagcaaagagggaaacgtactgatcagtggaggtgccgatcattcggtc
cgtgtatgggatttgaaaaaagccactaccgagccaagcgccgagccagatgagccattc
atcgggtacttaggcgacgttaccgcgtcaataaaccaggatataaaggaatacggacgc
agaaggacggtcatccccaccagcgatttagtggcatcgttctacaccaagaaaacaccc
gttttcaaagtcaaattcagcagaagcaatttggctcttgcggggggcgccttcagacca
taa

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