Saccharomyces eubayanus: DI49_1312
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Entry
DI49_1312 CDS
T08138
Name
(RefSeq) SNF5-like protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
seub
Saccharomyces eubayanus
Pathway
seub03082
ATP-dependent chromatin remodeling
seub03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
DI49_1312
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
DI49_1312
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
seub01009
]
DI49_1312
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seub03021
]
DI49_1312
03036 Chromosome and associated proteins [BR:
seub03036
]
DI49_1312
Protein phosphatases and associated proteins [BR:
seub01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
DI49_1312
Transcription machinery [BR:
seub03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
DI49_1312
SWI/SNF complex
DI49_1312
Chromosome and associated proteins [BR:
seub03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
DI49_1312
PBAF complex
DI49_1312
SWI/SNF complex
DI49_1312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
28930449
NCBI-ProteinID:
XP_018223315
LinkDB
All DBs
Position
IV:950461..953151
Genome browser
AA seq
896 aa
AA seq
DB search
MNNQPQGGNSVPNSIGNIFSNIGTPSFNMAQIPQQLYQSLTPQQLQMIQQRHQQLLMSRL
QQQQQQQQQQQXQQQQQQQQQQPQRQTSPPSQTQQSPPPPPSAPLQQSQSMASQSATSTP
PPPPPPPAPINLPPQIAQLPLATQQQVLNRLRQQAIAKNNPQVVDAITVAQQQVQRQIEQ
QREQQTAQTQLEQQRQLLVQQQQQQQLRNQMQRQRQQQFRHQVQIQQQQQQQQQQQQQQV
QQQQQVQQQQQVQHQQQQHQPQQQQQQQRMPSARSIGDQPSTISHPTVGQLPQLPKLNLP
KFQTIQYDPPESKLPYPTYWSDKGADTDTLLYEQIIQRDKINKFSLVRETNGYDPFSIYG
FSNKEYISRLWHTLKYYQDLKNTRMKSITNTSQKISSASIWGNGYSGYGNGITNTTTRVI
PQVEVDNRKHYLEDKLRVYKQAMSETTEELVPIRLEFDQDRDKFFLRDTLLWNKNDELIK
IEEFVDDMMRDYRFEDSTREQHIDTICQSIQEQIQEFQGNPYLELNQDRLGGDDLRIRIK
LDIVVGQNQLIDQFEWDISNSDNCPEEFAESMCQELELPGEFVTSIAHSIREQVHMYHKS
LALLGYNFDGSVIEDDDIRSRMLPTITIDDVYRPAAESKVFTPNLLQISAAELERLDKDK
DRDTRRKRRQGRSNRRGMLALTGTSTNSMSMNGAHNGAATGNASLLPSGEILLPDIADIP
RTFRTPVPSTLMPGGVDVGPSVESYELRTTTTYKAKPDRPKPVPPPCYIIDHIPGHSLLL
SIKVPKKEEAQEDFATMIEPNNSTNPMLPRPGSLKSRLNSNIRAGVTIPTGANPIGNHAT
TSSLNPTLPPAIPTGVAGKTVPVPTPPTLPSVAPHGSDRILSNNNGDTNNNNNNNT
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcagccgcaaggtgggaacagcgtccccaatagtatcggcaatatattcagc
aatatcgggactccgtccttcaatatggcgcaaattccgcagcagctgtaccaaagtctt
actccccagcaattgcagatgattcaacaacgacaccaacaattactaatgagccgccta
caacaacaacaacaacaacaacaacaacaacaacmacaacaacaacaacaacaacaacaa
caacagccacaaagacagacttcaccaccatcacaaacacagcaatcaccacctcctccc
ccttccgctcctctgcaacaatcacagtccatggctagtcaatctgcaacatctaccccg
cctcctcctcctcctcctccagcgccaattaatttgcctccccagattgctcagctaccc
ttggctacacagcaacaagttttaaatagattgaggcaacaggccatcgcaaagaataat
ccgcaagtagtggatgctatcaccgtggcacaacaacaagttcaacgtcaaattgagcaa
cagagggaacagcagactgcccaaactcaactagaacagcaaaggcaacttttggttcag
cagcaacagcagcagcaacttagaaaccaaatgcaacgacaacggcagcaacaatttagg
catcaagtccaaatacaacaacagcagcagcaacaacaacaacaacaacaacaacaagtc
cagcaacaacaacaagtccagcaacaacaacaagtccagcaccaacagcaacaacatcag
ccacaacagcaacagcaacaacagcgaatgccttctgccagatccataggcgatcaacct
tccaccatttcccatcctactgttggacaacttcctcaattacctaagctaaacttacct
aagtttcaaacgattcagtacgacccaccggaatccaagttaccatacccaacgtattgg
tcagataaaggagcagacacagatactttattgtatgaacaaataattcagcgtgacaaa
attaacaagttctccttagtgagggaaactaacggttacgatccattcagtatttatgga
ttcagtaataaagaatatataagcagactgtggcacacattaaaatattatcaggactta
aaaaacaccaggatgaaatctataactaacacctcacagaagatttcatcagcaagtatc
tgggggaatggttattcaggatacgggaacggaatcacaaatacaaccacaagagttata
cctcaagttgaagttgataatagaaaacactaccttgaagataagttgagagtttataaa
caggcaatgagtgaaacaacagaggaattggttccgataagattggaattcgaccaagat
cgtgacaaattcttcctaagagatacattgctatggaacaaaaatgatgaacttatcaag
attgaagaatttgtggatgacatgatgcgagattatcgatttgaagattcgaccagggag
caacacatagataccatatgtcagtccatacaagaacaaatccaagaatttcaaggaaat
ccatatttagaattgaatcaggatcgcttgggtggtgatgatttacgaattagaatcaag
ctggatattgtggtgggacaaaaccaacttatcgatcaatttgaatgggatatctctaat
agtgataattgtcccgaagaatttgcagaatccatgtgccaagaactggaattgcccggt
gagtttgttacatccattgcacactcgataagagaacaggttcacatgtaccacaaatcg
ctggcattgttaggctataactttgatggatcagtgatagaagacgatgacattagaagc
aggatgctgcccacaattacgattgacgatgtttatagacctgcagcagaaagtaaagtc
ttcactccaaaccttcttcaaatttcagcagcggaactagaaagattggataaggataag
gatagagatacaagaaggaaaagaagacaaggcagatctaatagacgtggtatgcttgca
ttgaccggtacatcgacaaacagtatgtccatgaacggtgctcataatggagcagcaacg
gggaacgcttcattgttaccatcaggggagattttgctgccagatatcgcagatattccg
agaactttcagaacaccagtaccaagtactctaatgcccggcggtgttgacgtgggacct
tcagtggaatcatacgaattgagaaccacgactacatataaggctaagccagatagaccc
aagccagtcccgcccccttgctacattattgaccacattccaggtcattcgctattactt
tctatcaaagtgcctaagaaagaggaagcccaagaagattttgcgacgatgattgaaccg
aacaatagcaccaatccaatgcttccaaggcctggctccctgaagtccagattgaatagt
aatattcgcgctggtgtaactattccgacaggtgcgaaccctattggaaatcacgctact
acaagctccctcaatccgacactaccgcctgccattccaaccggagtagccggaaagaca
gttcctgtacctactccaccaacgctaccctcagtagctccccatggtagtgaccggata
ctttcaaacaataatggtgatactaataataataataataataatacataa
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