Saccharomyces eubayanus: DI49_1652
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Entry
DI49_1652 CDS
T08138
Name
(RefSeq) SPB4-like protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
seub
Saccharomyces eubayanus
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
seub03009
]
DI49_1652
Enzymes [BR:
seub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DI49_1652
Ribosome biogenesis [BR:
seub03009
]
Eukaryotic type
Pre-60S particles
Helicases
DI49_1652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
28930789
NCBI-ProteinID:
XP_018222534
UniProt:
A0A0L8RKY7
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Position
VI:complement(119490..121310)
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AA seq
606 aa
AA seq
DB search
MSKSLEWNNLDYSLLPWIRTGLDVMGFESMTPVQASTIPMLAGNKDVVVDSVTGSGKTAA
FVIPILEKIVQEEANSPKFKKAHFHSLIIAPTRELSRQIESVVLSFLEHYPSDSFSIKCQ
LLIGTNEATVRDDVSNFLQNRPQILIGTPGRVLDFLQMPAVKTSACSMVILDEADRLLDV
SFIKDTERILRLLPKQRRTGLFSATMRSAGSDIFKTGLRNPVRITVNSKHQAPSSLKLNY
CVVNPLEKLQLLVSVLNNYKFKKCIVYFPTCVSVSYFYSFVQYLAKKKILTSEVEVFSLH
GKLQTSARTKTLAAFTDSLNNSVLFTTDVAARGIDIPEVDLVIQLDPPTNSDMFMHRCGR
TGRANRVGKAITFLNRGREEDFVAFMQVKNVELEEVDFKIKGITENFYDTFKDWVLEDRD
RFDKGVKAYVAFIKYYTNHSASSIFRLQSLDYVGIAKMYGLFRLPRMPEITKYLTTENQE
GVFSGNWLVDPPININEYRYKDKKREKERQEALNNLSLINDKKKLKSELKKKNLAWSDKT
STKERKLERKEKMSSKRKAIEEELKAEELIENDEEGHIQEDWKEIVLQNKRKKHSNNATQ
GSFDDL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatcattagaatggaataatctagattattctttacttccctggataaggaca
ggactggatgttatgggctttgagagcatgactccagttcaagcgtccacaattcccatg
ctcgctggaaataaagatgtcgtggtagattccgttacaggatccggcaaaaccgcagcg
tttgttatacctatattggaaaaaattgtacaagaggaggcaaactcacccaaattcaag
aaagcgcactttcattccttaatcattgctccaacaagagaactatcacgtcaaattgaa
tcagttgttctatcatttctggagcattatccttctgattcattttctattaaatgccag
ctgttgattggtactaatgaagctacagtcagagacgacgtaagtaattttctacagaat
cggcctcagattctaattggaacacccggtagggttttggactttctgcaaatgccggca
gtcaaaacgtcagcatgtagtatggtaattttggatgaagcggatagattattggatgta
agtttcatcaaagataccgaaagaattctgagactactacccaagcaaagaagaacgggt
ctattttccgcaactatgcgtagtgccggctcggatatcttcaagacagggctcaggaat
cctgttaggattacagtgaattctaagcaccaagcgccctcctctttgaaattaaattac
tgtgttgtaaatcctctggaaaaattgcaactactagtcagtgttttgaataattacaag
ttcaaaaaatgtattgtatacttcccaacatgtgtgtcagtctcttatttctactcattt
gttcaatatttagcaaagaaaaagatattgacgagtgaagtagaagtattctcgttgcac
gggaagcttcagacatcagcgagaacgaaaactttagcagcttttacagattccctaaat
aattctgtgctgtttactactgatgtagcagctagaggtatcgatataccggaggtggat
ttggttattcagctcgatcctccgaccaattcagatatgtttatgcatagatgtggcaga
acaggtagagcaaatagggttggtaaagcaataacatttcttaacagaggtagagaagag
gattttgttgcttttatgcaagtcaaaaatgtggaacttgaagaggttgattttaaaatt
aagggtatcacagagaatttttacgatacttttaaggattgggtgcttgaagatcgggat
agatttgacaaaggtgttaaagcatatgttgcctttattaaatactatacaaatcattct
gcaagttccatttttagacttcaatcgttagattatgttggtattgcaaagatgtatggt
ctcttccgtttacctcgaatgcctgagataacgaaatatctaactactgaaaaccaggaa
ggagttttctcaggaaactggctggtggatcctccaattaatattaatgaatatagatac
aaggacaaaaagcgtgaaaaggagaggcaagaagccttgaataatttaagtcttataaat
gataagaagaagttgaaaagtgagttaaaaaagaagaatttagcttggtcagataaaacc
tcaacgaaagagcgaaaactcgagaggaaggaaaaaatgagttcgaagaggaaggccata
gaggaagaactcaaagcagaagaactcatcgaaaatgacgaggagggacatattcaagag
gactggaaagagattgtcttgcaaaataagaggaagaaacattccaataatgccactcaa
ggcagcttcgacgatctttaa
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