KEGG   Saccharomyces eubayanus: DI49_1765
Entry
DI49_1765         CDS       T08138                                 
Name
(RefSeq) SKI8-like protein
  KO
K12601  superkiller protein 8
Organism
seub  Saccharomyces eubayanus
Pathway
seub03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DI49_1765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:seub03019]
    DI49_1765
Messenger RNA biogenesis [BR:seub03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     DI49_1765
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz ANAPC4_WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_SPT8 EIF3I Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 Beta-prop_Nup120_160 Beta-prop_Vps41 RMC1_N
Other DBs
NCBI-GeneID: 28930902
NCBI-ProteinID: XP_018222036
LinkDB
Position
VII:complement(91020..92213)
AA seq 397 aa
MSKVFIATANAGKAHEADIFSITACNSFTISCSGDGYLKLWDNKLLDNENPKEKSYAEFV
HKTGLHHVDVLQTIEKDAFEMCLVATTSFSGDLFFYRITRENGSKKVIFEKLDLLSADMK
KNSFWALKWCASNDRLLSHRLIATDVKGTTYIWKFYPFEDQTGSSSPDWKPVLELQGTIV
SPMTPNQFATCVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVQ
FSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHCSQTSLGEFAHSSWVTSLSFN
DSGDTLCSAGWDGKLRFWDIKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDV
KFMKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgtccaaagtgttcattgctacagccaatgccggaaaagctcacgaagccgatattttc
tctatcaccgcatgtaattctttcacaataagttgttcaggtgatggttacttgaaacta
tgggataataaactattggataatgaaaacccaaaggagaaatcttacgctgagtttgtc
cacaagactgggctacaccacgtggacgttttgcagaccattgagaaggacgcgttcgaa
atgtgccttgtcgctaccacttcattttctggcgatttattcttttatcgaattacaaga
gaaaatgggagcaagaaagttatatttgagaaactggatctgttgagtgcagatatgaag
aagaactccttttgggctttgaaatggtgcgcttcaaatgatagactactgtcgcataga
ctaattgctacagatgtgaagggaaccacttacatttggaagttttatccattcgaagac
caaactggctcttcgtcaccagactggaaaccggtattggaactgcaaggtacaattgtg
tcgccgatgacgccaaatcaatttgccacatgcgtggatatctctgaacgagggctaatt
gccacagggtttaataatggaaccgtacaaatttcagaattatctacattacgtccattg
tacaattttgaatcacaacattctatgatcaataactctaactccattagatcggttcaa
ttttcccctcagggatccttattggctattgcgcacgattcgaattcattcggttgtata
actttgtatgaaactgaatttggtgagagaattggctcattatccgtcccaacacattgt
tcacagacaagtctcggagaatttgcacactccagttgggtgacaagcctatcgttcaat
gattctggtgacactctgtgtagtgccggatgggatggaaaactaagattttgggatata
aaaacgaaggaaagaatcacaactctaaatatgcattgcgacgatattgaaattgaagaa
gacatcttggccgtcgatgagcacggagattctttagctgaaccaggtgtgtttgacgta
aaattcatgaaaaaaggttggagatctggtatgggagctgatttgaatgaaagcttgtgc
tgtgtatgtctagatagaagcattaggtggtttagagaagccggtggtaaataa

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