Saccharomyces eubayanus: DI49_1854
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Entry
DI49_1854 CDS
T08138
Name
(RefSeq) PRP43-like protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
seub
Saccharomyces eubayanus
Pathway
seub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DI49_1854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
seub03041
]
DI49_1854
03009 Ribosome biogenesis [BR:
seub03009
]
DI49_1854
Enzymes [BR:
seub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DI49_1854
Spliceosome [BR:
seub03041
]
Complex A
U2 snRNP components
U2 related factors
DI49_1854
Complex B
DI49_1854
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
DI49_1854
Ribosome biogenesis [BR:
seub03009
]
Eukaryotic type
90S particles
Helicases
DI49_1854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
SRP54
Flavi_DEAD
ResIII
AAA_23
AAA_7
nSTAND3
AAA_30
T2SSE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
28930991
NCBI-ProteinID:
XP_018222120
UniProt:
A0A0L8RJ86
LinkDB
All DBs
Position
VII:complement(283734..286034)
Genome browser
AA seq
766 aa
AA seq
DB search
MGSKRRFSSEHPDPVQTSIPEQAAEIAEELTKQHPPPSAEALVHHDAGEFKGIERHHTTA
EQAQNLENGVVNPFTGREFTPKYVDILKIRRELPVHAQRDEFLKIYQNNQIMVFVGETGS
GKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFEN
KTSNKTILKYMTDGMLLREAMDDHDLSRYSCIILDEAHERTLATDILMGLLKQVIKRRPD
LKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHAT
EEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEAA
PESHNGRPGRKIVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS
AQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF
DFMDPPAPETMMRALEELNYLACLDDEGNLTSLGRLASQFPLDPMLAVMLIGSFEFQCSQ
EILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHGFKSDEAYEYGIH
KWCRDHYLNHRSISAADNIRXQLERLMNRYNLELNTTDYDSPKYFDNIRKALASGFFMQV
AKKRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIE
IAPAYYDMDNFQKGDVKLSLERIKEKVDRLNDLKQDKTKKSKHSKK
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaaaagaagattttcgtcagagcatccagatccagttcaaacttctattcca
gagcaggctgctgagattgctgaggaattaacgaaacagcatcctcctccatctgcagaa
gcgctagtgcaccatgatgccggtgagtttaaaggaatagaacgtcatcacactaccgca
gagcaagcccaaaatttggaaaatggagtggtaaatccgtttactggcagagagttcaca
ccaaaatatgtcgatatcttaaagattagaagagaattgcctgtccatgctcaaagagat
gagtttttgaaaatttatcaaaataaccaaatcatggtcttcgttggtgaaaccggttcc
ggtaagactacacaaattccccaatttgtcttattcgatgagatgccccatttagaaaac
acgcaagttgcatgtacccagcctcgtcgtgttgccgcaatgtctgttgcacagagagtc
gcagaagaaatggatgtcaagctgggtgaagaagtcggttactccattagattcgaaaac
aagacctctaataagaccatattgaaatatatgactgatggtatgttgttgagagaggca
atggatgatcacgatttatcccgttactcttgtattattttagatgaagcgcacgaacgt
actttagctactgatattttaatgggtcttctaaagcaagtaatcaagagaagacctgac
ttgaaaatcattatcatgtccgccactttagatgctgaaaagttccaacgttacttcaac
gatgccccattacttgctgttccaggtagaacttatccagttgaactatactatactcct
gaatttcaaagagactatttagattcggccattcgtactgttttacagattcacgcgaca
gaagaagctggtgatattttgttgtttttaacaggtgaagatgaaattgaagacgcagta
aggaagatttctttagagggtgaccagttagtcagagaagagggatgcggaccattgtct
gtgtaccccttatatggttcgttaccaccacaccaacagcaaagaattttcgaagcagct
ccagaatcacataatggtagaccgggtagaaaaattgtcatctctaccaatattgctgaa
acttccttaacaattgatggtattgtctatgttgtcgacccaggtttctcaaagcaaaaa
gtttacaatcccagaatcagagttgagtctttgttagtttctcctatctccaaggcctct
gcccaacaaagagctggtcgtgctggtcgtacaagacctggtaaatgtttcagattatac
actgaggaagcatttcaaaaagaactgatagaacaaagttatccagaaatcttacgttcc
aatttatcttctactgttttagaactgaaaaaactgggtattgatgatttagtgcatttt
gactttatggatccaccggcccctgaaacaatgatgagagctcttgaggagttgaactat
ttggcctgtttagatgatgaaggtaacttaacatccttgggtaggttggcatctcaattc
ccattagatccaatgttagctgtgatgttgattggttctttcgaattccaatgctcccaa
gaaatactgaccatagtggccatgttatcagtaccaaatgtattcattcgtccaacaaag
gacaagaaacgcgcagatgatgccaagaacatattcgctcacccagatggtgatcatatc
actttactaaacgtatatcacgggttcaagtcagacgaggcttatgaatatggtattcat
aaatggtgccgtgatcactacttaaatcacagatctatttccgctgcagataacattcgc
yctcaactagaaagattaatgaaccgttacaacttagaactaaacactacagattatgat
agccccaaatatttcgataacatcagaaaggctcttgcctctgggttcttcatgcaagta
gcaaagaagagatctggtgcaaagggatacatcacagtgaaagacaaccaagacgtcttg
atccaccccagtacagttcttggtcatgacgcagaatgggtcatttacaatgaattcgtc
ctcacgtcgaagaattacataagaacagtcacatctgttagacccgaatggctaattgaa
atagcacctgcatactacgatatggacaatttccaaaagggtgatgtcaaactgtcgcta
gaaagaatcaaggaaaaagtagatagattgaacgacttgaagcaagataaaaccaaaaag
agcaagcactctaagaaataa
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