KEGG   Saccharomyces eubayanus: DI49_2162
Entry
DI49_2162         CDS       T08138                                 
Name
(RefSeq) SKI6-like protein
  KO
K11600  exosome complex component RRP41
Organism
seub  Saccharomyces eubayanus
Pathway
seub03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DI49_2162
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:seub03019]
    DI49_2162
Messenger RNA biogenesis [BR:seub03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     DI49_2162
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     DI49_2162
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 28931299
NCBI-ProteinID: XP_018222399
UniProt: A0ABN8VVR8
LinkDB
Position
VII:856053..856793
AA seq 246 aa
MSRLEIYSPEGLRLDGRRWNELRRFETSINTHPHAADGSSYLEQGNNKIITLVKGPKEPR
LKSQMDTSKALLNVSVNITKFSKFERSKSSHKNERRVLEIQTSLVRIFEKNVMLNIYPRT
VIDIEIHVLEQDGGIMGTLINGITLALIDAGISMYDYISGISVGLYDTTPLLDINSLEEN
AMSAVTLGVVGKSEKLSLLLIEDKIPLDRLENVLAIGIAGAHRVRDLMDEELRKHAQKRV
TNASAR
NT seq 741 nt   +upstreamnt  +downstreamnt
atgtcaagattagaaatatattcaccagaagggctacgtctagacggacgtcgatggaat
gaactgcgtcgtttcgaaacttccatcaacactcatccgcatgctgctgatggctcttcc
tacttggaacaaggtaacaacaaaatcatcactctcgtgaagggtccaaaggaaccaagg
ttgaagtctcaaatggatacttcgaaggccctgttaaacgtttccgtaaacattacaaaa
ttctccaaattcgaaaggagcaaatccagtcataaaaacgaaaggcgtgtccttgagatt
caaacttcgttagtaagaatcttcgaaaaaaacgtaatgttgaacatttaccccagaaca
gttatcgatatcgaaatccacgtccttgagcaggatggtggtatcatgggcacactgatc
aatggtatcacgctcgctctgatagacgctggtatatcgatgtacgattacataagtggt
atctccgtcgggctgtatgacaccaccccactactagatatcaattcgctagaagaaaac
gctatgagtgcagtgacactaggtgtcgtggggaagtcggaaaaactatctctattattg
atagaagataaaatccccttggacagactagagaacgtcctagccatcggtattgcgggt
gctcatagagtaagagacctgatggatgaagagttaagaaaacatgcccaaaaaagagtc
actaatgcctctgccaggtaa

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