Saccharomyces eubayanus: DI49_2162
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Entry
DI49_2162 CDS
T08138
Name
(RefSeq) SKI6-like protein
KO
K11600
exosome complex component RRP41
Organism
seub
Saccharomyces eubayanus
Pathway
seub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DI49_2162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_2162
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
DI49_2162
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
DI49_2162
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
28931299
NCBI-ProteinID:
XP_018222399
UniProt:
A0ABN8VVR8
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Position
VII:856053..856793
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AA seq
246 aa
AA seq
DB search
MSRLEIYSPEGLRLDGRRWNELRRFETSINTHPHAADGSSYLEQGNNKIITLVKGPKEPR
LKSQMDTSKALLNVSVNITKFSKFERSKSSHKNERRVLEIQTSLVRIFEKNVMLNIYPRT
VIDIEIHVLEQDGGIMGTLINGITLALIDAGISMYDYISGISVGLYDTTPLLDINSLEEN
AMSAVTLGVVGKSEKLSLLLIEDKIPLDRLENVLAIGIAGAHRVRDLMDEELRKHAQKRV
TNASAR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagattagaaatatattcaccagaagggctacgtctagacggacgtcgatggaat
gaactgcgtcgtttcgaaacttccatcaacactcatccgcatgctgctgatggctcttcc
tacttggaacaaggtaacaacaaaatcatcactctcgtgaagggtccaaaggaaccaagg
ttgaagtctcaaatggatacttcgaaggccctgttaaacgtttccgtaaacattacaaaa
ttctccaaattcgaaaggagcaaatccagtcataaaaacgaaaggcgtgtccttgagatt
caaacttcgttagtaagaatcttcgaaaaaaacgtaatgttgaacatttaccccagaaca
gttatcgatatcgaaatccacgtccttgagcaggatggtggtatcatgggcacactgatc
aatggtatcacgctcgctctgatagacgctggtatatcgatgtacgattacataagtggt
atctccgtcgggctgtatgacaccaccccactactagatatcaattcgctagaagaaaac
gctatgagtgcagtgacactaggtgtcgtggggaagtcggaaaaactatctctattattg
atagaagataaaatccccttggacagactagagaacgtcctagccatcggtattgcgggt
gctcatagagtaagagacctgatggatgaagagttaagaaaacatgcccaaaaaagagtc
actaatgcctctgccaggtaa
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