KEGG   Saccharomyces eubayanus: DI49_2311
Entry
DI49_2311         CDS       T08138                                 
Name
(RefSeq) RFC4-like protein
  KO
K10755  replication factor C subunit 2/4
Organism
seub  Saccharomyces eubayanus
Pathway
seub03030  DNA replication
seub03410  Base excision repair
seub03420  Nucleotide excision repair
seub03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DI49_2311
   03410 Base excision repair
    DI49_2311
   03420 Nucleotide excision repair
    DI49_2311
   03430 Mismatch repair
    DI49_2311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:seub03032]
    DI49_2311
   03036 Chromosome and associated proteins [BR:seub03036]
    DI49_2311
   03400 DNA repair and recombination proteins [BR:seub03400]
    DI49_2311
DNA replication proteins [BR:seub03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    DI49_2311
  DNA Replication Termination Factors
   ELG1-RFC complex
    DI49_2311
Chromosome and associated proteins [BR:seub03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    DI49_2311
DNA repair and recombination proteins [BR:seub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     DI49_2311
  Check point factors
   HRAD17(Rad24)-RFC complex
    DI49_2311
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_14 AAA_22 AAA_16 RuvB_N TniB Viral_helicase1 AAA_lid_RFC1 nSTAND3 nSTAND_NTPase5 RCF1-5-like_lid AAA_3 Mg_chelatase NTPase_1 AAA_assoc_2 AAA_19 NB-ARC MeaB FtsK_SpoIIIE M_Eco57I_C ATPase_2 NPHP3_N RNA_helicase
Other DBs
NCBI-GeneID: 28931448
NCBI-ProteinID: XP_018221699
UniProt: A0ABN8VNA2
LinkDB
Position
XV:complement(<110137..>111108)
AA seq 323 aa
MSKILSLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVH
CLAHELLGSSYGDGVLELNASDDRGIDVVRNQIKHFAQKKLHLPQGKHKIIILDEADSMT
AGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLEVIK
LEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFRIVDSPHPLIVKKML
LATNLDDSINILRTDLWKKGYSSIDIVTTSFRVTKNLTQVKESVRLEMIKEIGLTHMRIL
EGVGTYLQLASMLAKIRKLNTKV
NT seq 972 nt   +upstreamnt  +downstreamnt
atgtccaagattttgtctttgcaacttccatgggtggagaaatatcgccctcaggtttta
tctgatatagtcggtaataaagaaaccattgatcgacttcagcaaatcgctaaagatggt
aacatgccccatatgataatatctggtatgccgggtataggtaagaccacctcggtacat
tgccttgcgcatgagctgctgggcagttcctacggcgatggtgttttggaattgaacgct
tcagacgatagaggtattgatgtcgtcagaaaccagataaaacactttgcccagaagaaa
ttgcatcttcctcaaggtaaacataagatcatcatcctcgatgaagcggactccatgaca
gctggtgctcagcaagcattgagaagaaccatggaattatactcgaattcaaccagattc
gcatttgcctgtaatcaatctaataagatcattgagccattacaaagtagatgcgcaatt
ttaaggtactctaagctatcggatgaagacgttctaaaacgtctcttggaggtcataaaa
ctagaagatgtcaaatacacgaatgatgggttagaagcaataatttttactgccgaaggt
gatatgagacaagctataaacaatttacaaagtactgtagcaggacatggcttagtcaac
gctgataatgttttcaggatcgtcgattccccacatccattaatagtgaagaaaatgcta
ctagccaccaacctagacgattccatcaacatcttgagaacggatctttggaaaaagggt
tattcctcaattgatatcgtaacaacatccttccgtgtcactaaaaacttgacgcaagtt
aaggaatcagtaaggttagaaatgataaaggaaattggcctaactcatatgagaattttg
gaaggtgtcgggacttacttacaattggctagtatgttagccaaaattcgtaaactaaat
actaaagtctaa

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