Saccharomyces eubayanus: DI49_2315
Help
Entry
DI49_2315 CDS
T08138
Name
(RefSeq) MSH2-like protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
seub
Saccharomyces eubayanus
Pathway
seub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DI49_2315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seub03400
]
DI49_2315
DNA repair and recombination proteins [BR:
seub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
DI49_2315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
Motif
Other DBs
NCBI-GeneID:
28931452
NCBI-ProteinID:
XP_018221703
LinkDB
All DBs
Position
XV:115823..118717
Genome browser
AA seq
964 aa
AA seq
DB search
MSSTRPDLKFSDVSEERNFYKKYIALPKKPLKTIRLVDKGEYYTVIGTDAIFVADSVYHT
QSVLKNCQLDSITAKNFVEPTKYVTVSLQVLATLLKLCLLDLGYKVEIYDKSWKLLKSAS
PGNIEQVNELMNLNIDSSIVIASMKIQWNSQDGNCVIGIAFIDTTGYKVGMLDIVDNEVY
SNLESFLIQLGVKECLVQDLTLNPNSNTELQKLINVIDRCGCVVTLLKNSEFSEKDVELD
LTKLLGNDLALSLPQKYSKLSMGACNALIGYLQLLSEQDQVGKYELVEHKLKEFMKLDAS
AIKALNLFPQGPQNPFGSNNLAVSGFTSAGNTGKITSLFQLLNHCRTNAGIRLLNEWLKQ
PLTDIKEITKRHDLVDYLIDQIELRQMLNTDFLPMIPDIRRLTKKLNKRGSLEDVLKIYQ
FSKKIPEIVQIFNSFLEDENPSEDVKELVRSMWLAPLSHHVEPLSKFEEMVETTVDLNAY
EENNEFMIKIEFNEELAKIRSKLDDLRDEIHSIHLDAAEDLGFDPDKKLKLENHHLHGWC
MRLTRNDAKELRKHKKYIELSTVKAGIFFSTKQLKLIANETNVLQKEYDKQQSALVREII
NITLTYTPVFEKLSLVLAHLDVISSFAHTSSYAPIPYIRPKLHPMNSERRTHLVSSRHPV
LEMQDDVSFISNDVTLESGLGDFLIITGPNMGGKSTYIRQVGVISLMAQIGCFVPCEEAE
IAIVDAILCRVGAGDSQLKGVSTFMVEILETASILKNASQNSLIIVDELGRGTSTYDGFG
LAWAIAEHIAGKIGCFALFATHFHELTELSEKLPNVKNMHVVAHIEKNADEQKHDDEDIT
LLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELDDLKINNENMKKAKLSLQEVN
EGNIRLKTLLKEWIRRAKEEGLDDPSKISEEASQHKIQELLRAIASESEYENDNYLKYIR
KLLL
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctaccagacctgatttgaagttttctgatgtatcagaagaaagaaacttttac
aaaaagtatattgcattaccgaagaagccattaaaaaccatcagattggttgataaaggt
gaatattatacggttataggcacagacgccatttttgttgctgattcagtgtatcacact
cagtctgttttgaaaaattgtcaattggactccataacggcgaaaaacttcgttgaaccc
accaaatacgttaccgtttctttacaagttcttgctactctactgaaactatgcttgttg
gatcttggctacaaagtcgaaatctacgacaagagttggaaactactcaagagcgcatcg
ccggggaatatcgagcaagttaatgagttgatgaatttgaatattgattcaagtatcgtc
attgcaagcatgaaaattcaatggaattctcaggacggaaattgtgttattggcattgca
ttcatcgataccactggttacaaagttggtatgcttgatattgtcgataatgaagtgtac
tccaacctagaaagtttcttgattcaattgggtgtgaaagaatgtttggtgcaagatctt
actttgaatccgaattcgaacaccgaattacaaaaactaattaacgttatcgatcgttgt
ggatgtgtcgttacattattgaaaaactccgaattttccgagaaagacgtcgaattggac
ttgactaagctattaggtaacgatttggctttatcgttaccccaaaagtattctaaacta
tccatgggtgcgtgtaacgcattgatcggctatttgcaattattgtcagagcaagaccaa
gtcggcaaatatgagctggtcgaacataaattaaaagaatttatgaagttggatgcttct
gccattaaggctcttaaccttttcccccaaggtccacaaaatccattcgggagtaacaat
ttagctgtttctgggtttaccagtgctggaaatactggcaagataacatctctttttcaa
ttgctgaaccactgtaggacaaacgctggcattcggcttttaaatgagtggttgaagcaa
ccattgactgacattaaggagattactaaaagacatgatttggttgactacttgatcgac
caaattgaattgagacagatgctcaatactgactttttaccgatgatcccagatatccgt
aggttaaccaaaaaattaaataagaggggaagcttagaagacgtcttgaaaatttaccaa
ttcagtaaaaagataccggaaattgttcaaattttcaactcgttcctagaagacgaaaat
cctagtgaagatgtaaaggaattggtccgttccatgtggttggctccgctgagtcatcat
gttgagcctttatctaagttcgaagaaatggttgaaaccactgtggatttgaatgcttac
gaagaaaataatgaattcatgatcaagatcgagtttaatgaagaattggctaaaataaga
agtaaactagatgacttgcgtgatgaaatccattcaattcatctggatgctgctgaagac
ctagggtttgatccagacaagaaattgaagttggagaatcatcatttgcacggttggtgt
atgagattgacacgtaacgacgccaaagaattgcgtaaacataaaaagtacattgagctg
tctactgtaaaagcaggtattttcttcagtaccaagcaactaaagttaattgcgaacgaa
acaaatgttcttcaaaaggagtatgacaagcaacaatcagctttggttagagaaattata
aacataactttaacgtacaccccagtttttgaaaaactgtccttagtcttagcacatttg
gatgtgatttcctcctttgcccatacttcatcatatgccccaataccttatatcaggccg
aaattacaccctatgaattcggaaagaagaacacatctcgtaagttctcgccatccagtg
ctagaaatgcaagatgatgtgagctttatatctaatgacgtaacgttggagagtggttta
ggtgattttttaatcataacgggtccaaatatgggtggtaaatccacttacataagacaa
gtgggtgtaatttctctgatggctcaaattggttgttttgtaccttgtgaagaagctgaa
attgctatcgtggacgcgattctttgtagggttggtgcaggtgattcccagttgaaaggt
gtttctacgttcatggttgaaatattggaaacggcatccatattgaaaaatgcgagccaa
aattccttgattatcgttgacgaactgggacgtggtacaagtacctacgatggatttgga
ttagcttgggccattgccgaacatatcgcaggtaaaattggatgttttgcattgtttgcg
acccattttcatgaattaacagagctctctgaaaaattgcctaatgtcaaaaatatgcac
gttgtagcacatattgaaaagaacgcagacgaacaaaaacatgatgacgaggacattacg
ttattatataaagtcgagcctggtatttcagaccaatcttttggtatccatgttgcagaa
gtggttcagtttccagaaaaaattgtaaaaatggctaaacgtaaagcaaacgaacttgac
gatttgaagattaataatgaaaatatgaaaaaggctaaattatcattgcaggaagtcaac
gaaggtaacatacgcttgaagaccctactaaaggaatggatacgcagagcaaaggaggaa
gggttggatgatccaagcaaaatttctgaagaagcatcacagcataaaatacaagagtta
ttgcgtgctatagccagtgaatcggaatatgaaaatgacaattacttgaagtatataagg
aagttattattataa
DBGET
integrated database retrieval system