Saccharomyces eubayanus: DI49_2899
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Entry
DI49_2899 CDS
T08138
Name
(RefSeq) LSM1-like protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
seub
Saccharomyces eubayanus
Pathway
seub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DI49_2899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_2899
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DI49_2899
mRNA degradation factors
5'-3' decay
Lsm complex
DI49_2899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
28932036
NCBI-ProteinID:
XP_018221210
LinkDB
All DBs
Position
X:complement(184414..184932)
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AA seq
172 aa
AA seq
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MPANSRERAQSGQDNKRQQQHFSKKISEGEADLYLDQYNFTTTAAIVSSVDRKIFVLLRD
GRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENVVMLGEVDIDKE
DQPLDAMERIPFKEAWQIKQQNDEKRFKEETHRGKEMARHGIVYDFHKSDMY
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaaatagcagggagagagcccaatccggtcaagacaataaacgacaacagcaa
cacttctccaagaagatctcggaaggtgaagcagatttatatctcgaccagtacaatttt
actaccactgccgctattgtaagttcagtggaccgcaagatctttgtccttttacgtgat
gggagaatgctgttcggagtattgagaacatttgaccagtacgcaaacttgatactgcaa
gattgtgtggaaagaatatatttcagtgaagaaaacaaatacgccgaagaagaccgcggt
atattcatgattcgtggtgaaaatgtcgtcatgctgggcgaagtagatatcgataaagaa
gatcaaccccttgacgccatggagcgcataccattcaaggaagcctggcagattaaacag
caaaatgacgaaaaaagattcaaagaagaaactcatagaggtaaagaaatggcccgtcat
ggtatcgtttacgatttccataagtcagatatgtactag
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