KEGG   Saccharomyces eubayanus: DI49_2899
Entry
DI49_2899         CDS       T08138                                 
Name
(RefSeq) LSM1-like protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
seub  Saccharomyces eubayanus
Pathway
seub03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DI49_2899
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:seub03019]
    DI49_2899
Messenger RNA biogenesis [BR:seub03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     DI49_2899
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     DI49_2899
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 28932036
NCBI-ProteinID: XP_018221210
LinkDB
Position
X:complement(184414..184932)
AA seq 172 aa
MPANSRERAQSGQDNKRQQQHFSKKISEGEADLYLDQYNFTTTAAIVSSVDRKIFVLLRD
GRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENVVMLGEVDIDKE
DQPLDAMERIPFKEAWQIKQQNDEKRFKEETHRGKEMARHGIVYDFHKSDMY
NT seq 519 nt   +upstreamnt  +downstreamnt
atgccagcaaatagcagggagagagcccaatccggtcaagacaataaacgacaacagcaa
cacttctccaagaagatctcggaaggtgaagcagatttatatctcgaccagtacaatttt
actaccactgccgctattgtaagttcagtggaccgcaagatctttgtccttttacgtgat
gggagaatgctgttcggagtattgagaacatttgaccagtacgcaaacttgatactgcaa
gattgtgtggaaagaatatatttcagtgaagaaaacaaatacgccgaagaagaccgcggt
atattcatgattcgtggtgaaaatgtcgtcatgctgggcgaagtagatatcgataaagaa
gatcaaccccttgacgccatggagcgcataccattcaaggaagcctggcagattaaacag
caaaatgacgaaaaaagattcaaagaagaaactcatagaggtaaagaaatggcccgtcat
ggtatcgtttacgatttccataagtcagatatgtactag

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