Saccharomyces eubayanus: DI49_3035
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Entry
DI49_3035 CDS
T08138
Name
(RefSeq) LSM8-like protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
seub
Saccharomyces eubayanus
Pathway
seub03018
RNA degradation
seub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DI49_3035
09123 Folding, sorting and degradation
03018 RNA degradation
DI49_3035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_3035
03041 Spliceosome [BR:
seub03041
]
DI49_3035
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DI49_3035
mRNA degradation factors
5'-3' decay
Lsm complex
DI49_3035
Spliceosome [BR:
seub03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
DI49_3035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
28932172
NCBI-ProteinID:
XP_018221331
LinkDB
All DBs
Position
X:465789..466202
Genome browser
AA seq
137 aa
AA seq
DB search
MSLYAGCREKTRQDKTRQDKGTRQIPSSMSPILKEYLNKRVVIIKTDGQCLIASLDGFDK
NTNLFISNVFNRINKEFVCKAQILRGSEIALIGLLDIEDDDSLAPIDEAKIPMIKDTKNI
IENEHIVWEKVYESKTK
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgagcctatacgcaggctgcagggaaaagacaagacaagacaagaccagacaagacaag
gggacaaggcagataccaagctcaatgtcaccaatactcaaggaatacctgaataaaagg
gtcgttataatcaagactgacggccagtgtctcatagcaagcttggacggcttcgacaag
aacactaacctattcatatcgaacgttttcaaccgtataaataaagagtttgtctgcaaa
gctcagatacttcgaggcagcgaaatcgcgctcattggcctcttggacatcgaggacgat
gatagcctggctcctatcgatgaagcgaagataccgatgataaaagacaccaagaatata
attgaaaatgagcatatagtatgggagaaagtctatgaatcaaaaacaaaatga
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