KEGG   Saccharomyces eubayanus: DI49_3035
Entry
DI49_3035         CDS       T08138                                 
Name
(RefSeq) LSM8-like protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
seub  Saccharomyces eubayanus
Pathway
seub03018  RNA degradation
seub03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DI49_3035
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DI49_3035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:seub03019]
    DI49_3035
   03041 Spliceosome [BR:seub03041]
    DI49_3035
Messenger RNA biogenesis [BR:seub03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     DI49_3035
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     DI49_3035
Spliceosome [BR:seub03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    DI49_3035
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 28932172
NCBI-ProteinID: XP_018221331
LinkDB
Position
X:465789..466202
AA seq 137 aa
MSLYAGCREKTRQDKTRQDKGTRQIPSSMSPILKEYLNKRVVIIKTDGQCLIASLDGFDK
NTNLFISNVFNRINKEFVCKAQILRGSEIALIGLLDIEDDDSLAPIDEAKIPMIKDTKNI
IENEHIVWEKVYESKTK
NT seq 414 nt   +upstreamnt  +downstreamnt
atgagcctatacgcaggctgcagggaaaagacaagacaagacaagaccagacaagacaag
gggacaaggcagataccaagctcaatgtcaccaatactcaaggaatacctgaataaaagg
gtcgttataatcaagactgacggccagtgtctcatagcaagcttggacggcttcgacaag
aacactaacctattcatatcgaacgttttcaaccgtataaataaagagtttgtctgcaaa
gctcagatacttcgaggcagcgaaatcgcgctcattggcctcttggacatcgaggacgat
gatagcctggctcctatcgatgaagcgaagataccgatgataaaagacaccaagaatata
attgaaaatgagcatatagtatgggagaaagtctatgaatcaaaaacaaaatga

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