KEGG   Saccharomyces eubayanus: DI49_3081
Entry
DI49_3081         CDS       T08138                                 
Name
(RefSeq) RFC2-like protein
  KO
K10755  replication factor C subunit 2/4
Organism
seub  Saccharomyces eubayanus
Pathway
seub03030  DNA replication
seub03410  Base excision repair
seub03420  Nucleotide excision repair
seub03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DI49_3081
   03410 Base excision repair
    DI49_3081
   03420 Nucleotide excision repair
    DI49_3081
   03430 Mismatch repair
    DI49_3081
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:seub03032]
    DI49_3081
   03036 Chromosome and associated proteins [BR:seub03036]
    DI49_3081
   03400 DNA repair and recombination proteins [BR:seub03400]
    DI49_3081
DNA replication proteins [BR:seub03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    DI49_3081
  DNA Replication Termination Factors
   ELG1-RFC complex
    DI49_3081
Chromosome and associated proteins [BR:seub03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    DI49_3081
DNA repair and recombination proteins [BR:seub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     DI49_3081
  Check point factors
   HRAD17(Rad24)-RFC complex
    DI49_3081
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA_11 AAA_22 RuvB_N AAA_assoc_2 Mg_chelatase AAA_14 AAA_16 AAA_19 AAA_7 Cdc6_lid DUF815 SLFN-g3_helicase AAA_lid_RFC1 ResIII AAA_28 AAA_24 AAA_5 AAA_23 AAA_30 Parvo_NS1 AAA_2
Other DBs
NCBI-GeneID: 28932218
NCBI-ProteinID: XP_018221371
LinkDB
Position
X:<556128..>557189
AA seq 353 aa
MFEGFGQNKKRKTTKLATEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLQSANLPH
MLFYGPPGTGKTSTILALTKELYGPELMKSRILELNASDERGISIVREKVKNFARLTVSK
PSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCMICNYVTRIIDPL
ASRCSKFRFKALDANNAIDRLKYISEQENVKCDDGVLTKILDISAGDLRRGITLLQSASK
RAQYLGDGKNITSIQVEELAGVVPHDVLVEIVDKVKSGDFDEINRYVNIFMKSGWSGASV
VNQLHEYYITNDSFDTNFKNQISWLLFTTDSKLNNGTNEHIQLLNLLVKISQL
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgtttgaagggtttggacaaaataagaagcgtaaaacaacgaagttagctacagagcag
tcattggcacaacaaccatgggttgaaaagtatagacccaagaacttagatgaagtgaca
gctcaagatcatgcagtcaccgtcttgaaaaagacactacaatcagccaatttacctcat
atgctgttttatggccctccagggactggtaagacatctaccattttagcattgaccaaa
gaattgtatggtccagaattaatgaaatcaaggattttggagttgaatgcttctgacgaa
cgtggtatatctattgttagagaaaaagtgaagaatttcgcaagattaacggtgtctaaa
cctagcaaacatgacctggagaactatccatgtcctccatataagattatcattcttgat
gaagcagattcaatgaccgcagatgcacaaagtgctttgcgtagaacaatggaaacttac
tcaggcgtaacgagattctgtatgatttgtaattatgtgacaagaatcatcgacccatta
gcatcccgttgttcaaaattcagatttaaagctctagatgccaataatgctattgatcga
ttgaaatatattagcgaacaagagaacgtcaaatgcgacgatggtgttttgacaaaaatc
ttggatatctctgcgggagatttgagaagaggcattacgttactgcagtccgcttcgaag
agagcacaatacttaggtgacggtaaaaatataacatcgattcaagtagaagaattggct
ggtgtggtacctcatgatgttttggtggaaattgtcgacaaagtcaagagtggtgatttc
gacgaaattaatagatatgtgaacatattcatgaaaagcggttggtcaggtgcatcggtg
gtgaatcagctacacgaatactacattaccaacgatagcttcgatactaactttaagaac
caaatatcttggttactgttcactacggattcgaagttgaataatggtaccaatgagcat
attcaattactgaacttattagtcaagatatctcagctgtaa

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