Saccharomyces eubayanus: DI49_3101
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Entry
DI49_3101 CDS
T08138
Name
(RefSeq) FIP1-like protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
seub
Saccharomyces eubayanus
Pathway
seub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DI49_3101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_3101
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
DI49_3101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
28932238
NCBI-ProteinID:
XP_018221391
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Position
X:complement(<591840..>592832)
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AA seq
330 aa
AA seq
DB search
MSSSEDEDDKFLYGSDSELALPSSKRSRENEQEQDASNDPGTAKRQKQDSFEETVPTIAK
YDHSDEDIYSDSSNNESNSDVEVIISTGPDPTRLDAKLLGSYQNVTTSGSKDVISVATDV
PVTINKTSDERPAATEGETDQGVMTSESKAVTTEGEGNVPKTMVGSIDLDKEGIFESVGI
TTIDPEVLKEKPWRQPGANLSDYFNYGFNEFTWMEYLHRQEKLQQDYNPRRILMGLLTLQ
QQGKLNSSNDTDLNLGNMIDNNNNNNINNSNMSNLNNNMGNSMSGTPNPPAPPMHPSFPP
LPMFGSFPPFPMPGMMPPMNQQQNQNQNSK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagttctagtgaagatgaagacgacaaattcctgtacgggtccgactctgagttagca
ttgccttcgtccaaaagatctagagagaatgaacaagaacaagatgcctctaatgatccg
ggtacagccaagagacaaaaacaggattcttttgaggaaaccgttccaaccatagccaaa
tatgatcattccgatgaagatatatactctgattcctcaaataacgagagcaactctgac
gtagaggttatcataagcacaggccctgatcctactcggctagacgccaaattgttgggc
tcctatcaaaacgtaacaacatctggaagcaaagacgtaatcagcgtagctaccgacgtc
cctgtgaccataaataaaacatcagatgaaagacccgccgcaacagagggcgaaacagat
caaggcgtaatgacgtcagagtcgaaagccgttactacagagggtgaaggaaatgtaccg
aagacaatggttggatctattgatctagacaaagaaggcattttcgaaagcgtcggtata
acaactatagaccctgaagtactaaaggaaaagccttggagacaaccaggagctaattta
agtgattatttcaactacgggtttaatgagtttacctggatggagtatttgcatagacag
gaaaaattacaacaagattacaaccctagaaggatcctaatgggtttactaactctacaa
caacaaggcaagctaaactcttctaacgacacagacttgaatctcggcaatatgattgac
aacaacaacaacaacaacatcaacaattcgaatatgtccaatctaaataataatatgggt
aatagcatgtctggaacaccaaaccctcccgcaccaccgatgcatccaagtttcccacca
ttacccatgtttggtagtttcccaccattccctatgccaggtatgatgccacccatgaac
caacagcaaaaccaaaaccaaaattcgaaataa
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