Saccharomyces eubayanus: DI49_3345
Help
Entry
DI49_3345 CDS
T08138
Name
(RefSeq) PAN3-like protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
seub
Saccharomyces eubayanus
Pathway
seub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DI49_3345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_3345
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DI49_3345
mRNA degradation factors
3'-5' decay
Pan complex
DI49_3345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
28932482
NCBI-ProteinID:
XP_018221009
LinkDB
All DBs
Position
XI:complement(373458..375509)
Genome browser
AA seq
683 aa
AA seq
DB search
MEKINPDWAKDISCRNITIYGYCKKEKEGCPFKHNDNATATTTITTATNDVSSLLDASEA
ATPTMASVPKFNAKVSASFTPMTIGSDSLATASTTTSATTSTGGSITVAATSATTSTVNS
MASPVVDNTLPSNNNNSSNISISIPATASSSNYDPFNAPIFTPSSTSSIHTSTNAPSYPF
PTMTNSGGININVNDENNSNMSMTNNVPPPMPPPPMENNDLKYPRIYPPPHSLLQYHLYA
PEQPPSLKSLLKPNERSADQLFIPNNIREDLTKKNLSTLQIFPSSGKVIPSVVQDYFNLV
PLNFNNNDFLNKTTLFKVFSNYDGKPYVLKRLPNIDKSMNPSKISKIYQIWSKVNCTNLI
KFRDIFQTTKFGDLSICLIFDYYPNSLSLYDYHFVNFPKFPITMNYLWTYLVQLTNVMNS
IHSQNLNIGNTLNWTKVLITGDPGRIKLSHCDFMDSLFNEDVDSVVSSGGSTKERQQQLD
YKHLGQLLFNLSINTDNFNNNNTPREYQIDEITLQSIDDMKQIDDKFKDVLKYLLADGDV
KKSVHDLTSHFYDKMFMVLESSQTYTEYIESVLSRELENGRLFRLVNKLNCIFGRIESRI
DINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEKLMLVTPDEL
NCIIISYKELKDLIDSTFRSITQ
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatcaaccctgactgggcgaaggacatttcgtgcagaaatatcaccatatat
ggctattgcaaaaaagagaaagaaggttgccctttcaaacataacgataatgctaccgct
actactaccatcactaccgccactaacgacgtttcttctctcctagacgctagcgaagcg
gctaccccaaccatggcgtctgttcccaagttcaatgccaaggtttcggccagttttact
ccaatgacaattggcagtgattctttagccactgccagtaccaccacttccgctactacg
agtactggtggtagcatcactgtagcagctacctccgccactacttctactgttaactca
atggccagccccgtggtcgataacactttgcccagcaacaataacaacagtagcaacata
agcatatcgatacctgccaccgcctcgagttccaattacgacccattcaatgcccccatt
tttaccccttcttccacttcttcgattcacaccagtacgaatgcaccttcgtacccattc
cctaccatgaccaattctggaggcataaatataaacgttaatgatgaaaacaatagcaac
atgagcatgacaaacaacgtgccacctccaatgccaccgccccctatggagaataacgat
ctcaaatatccaagaatctatccgcctccacatagtcttttacaataccatctctatgcc
cctgagcaaccaccatcgttgaaatcgcttttaaaaccgaacgaaaggtctgctgaccaa
ctattcatcccgaataatattagagaagacttgacgaagaaaaacctttcgactctgcag
attttcccctcatccggtaaggtcataccaagcgttgttcaagattatttcaacttagtc
ccactaaatttcaataataacgattttttaaataaaactacccttttcaaagtcttttcc
aattacgacggtaagccatacgttttaaagagactacctaatattgataaatcgatgaat
ccaagcaaaatatccaaaatttatcaaatatggtcaaaggtaaactgtaccaatctaata
aaatttagagatattttccaaaccaccaaattcggtgacctatctatctgtttgatattt
gattattatccgaattcattatctttgtacgattaccattttgtcaatttccccaaattt
cccattacaatgaactatctatggacttacttagttcaattaaccaatgtgatgaattcc
atccattcgcaaaacttgaacattggaaatacattaaactggacgaaagttttaattact
ggtgacccaggtagaatcaaattgtcacattgcgactttatggactcgttgtttaatgaa
gatgttgactcagtagtgtcttccggcgggagtaccaaggaaagacaacaacaactggat
tacaagcacttgggacaactattattcaacttatcaatcaatactgataacttcaacaac
aataacacgccaagagaatatcaaatagatgaaattactttacaatcaatcgacgatatg
aaacagatagatgacaaattcaaagacgtgttgaagtatttattagctgatggcgatgta
aagaagagtgtccatgacctgaccagtcatttttatgataaaatgttcatggtcttggag
tcatcacaaacttacacagaatacatagaatccgtcttatcaagagaactggaaaatggc
aggttattcagactggtcaataaactaaattgtatctttggtagaatcgaatctagaata
gacataaattggtccgaatcaggtacgaagttccccattatactattttacgactacgta
tttcatcaagtggattcaaatgggaagccaataatggatttaacccatgtactaagatgc
ttgaacaaattagatgcaggtattcaagaaaaattaatgttagtcacgccggatgagttg
aactgtattattatatcctacaaggagttaaaagacttgatagactccacttttagatct
atcacccaatag
DBGET
integrated database retrieval system
