KEGG   Saccharomyces eubayanus: DI49_3532
Entry
DI49_3532         CDS       T08138                                 
Name
(RefSeq) SSL1-like protein
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
seub  Saccharomyces eubayanus
Pathway
seub03022  Basal transcription factors
seub03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DI49_3532
  09124 Replication and repair
   03420 Nucleotide excision repair
    DI49_3532
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:seub03021]
    DI49_3532
   03400 DNA repair and recombination proteins [BR:seub03400]
    DI49_3532
Transcription machinery [BR:seub03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     DI49_3532
DNA repair and recombination proteins [BR:seub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     DI49_3532
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2 Zn_ribbon_8
Other DBs
NCBI-GeneID: 28932669
NCBI-ProteinID: XP_018220437
LinkDB
Position
XII:164103..165503
AA seq 466 aa
MAPAVVSESEEDEDKVAVSRRSKRQVHFDGSGNERLGQQQQQQQQQQQRSSHRDKDRHAQ
RKKKKRLSNRNLQGASGGYAWEDEIKRSWDLVKVDDEGDMASLVASIVEARKKRTAKRNI
TPYQRGIIRSLILTLDCSEAMLEKDLRPSRHAMIIQYAIDFVHEFFDQNPISQVGIIIMK
NGLAQLVSQVSGNPQDHIDALKAIRKQDPKGNPSLQNALEMARGLLLPVPAHCTREVLIV
FGSLSTTDPGDIHQTIDSLVSEKIRVKVLGLSAQVAICKELCKATNYGDESFYKILLDET
HLKELFNEAITPLPVNKINKGFTLVKMGFPTRIFEDTPTFCSCHSKLVYGGYFCPNCHSK
VCSLPTVCPCCDLMLILSTHLARSYHHLMPLKTFTEVPTTESFRSEDCFSCQSRFPILKN
HKNGNLLTSSRYRCEDCGEEFCVDCDVFIHEILHNCPGCESKPVIT
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggctcctgcagtagtttcggaatctgaagaagatgaagacaaggtcgcggtctcaaga
agaagcaagagacaagttcatttcgatggttcgggcaatgaacgtttaggccagcaacag
cagcaacagcagcagcaacagcagcgttctagtcacagggataaagacaggcatgcacag
cggaaaaagaagaagaggctctcgaataggaatctgcagggtgctagcggagggtacgcc
tgggaagacgagatcaagagaagttgggatctcgtcaaagtggatgatgaaggagatatg
gcctctcttgtggccagtatcgtagaggccagaaagaagcgtaccgcaaagaggaatatc
acaccgtaccagaggggtatcatcagaagtctgatattgaccttggattgcagtgaggcg
atgctggaaaaagacctgagacccagcagacatgcaatgatcattcagtatgctatcgat
tttgttcacgagtttttcgatcaaaacccaatttctcaagtgggtatcatcataatgaaa
aacgggctggcacaactagtcagccaagtgagcggaaatccgcaagaccacattgatgct
ctgaaagctatcaggaagcaagatccaaagggaaatccctccttgcagaatgcgttggaa
atggcaagaggtttgctactgcctgtccccgcccactgcacaagagaagtgctgattgta
ttcggtagtctttccaccactgatcctggcgatattcatcaaactatcgattcgttggtg
agtgagaaaatcagagtgaaagttctggggttatcagctcaagtggccatttgtaaagag
ctatgtaaggcaacgaactacggtgacgaatctttctataagattttactcgacgagacc
catttgaaggagctattcaatgaggctattactccattacctgttaacaagataaataaa
ggtttcacactggtgaagatggggttcccgacacgaatatttgaagatactccaactttt
tgctcatgccactccaaactggtttatggtggttatttttgcccaaattgtcatagtaaa
gtctgttcattgcccacagtgtgtccatgctgtgatttgatgctgatcctctctacccat
ttagccagatcataccaccacttaatgccattgaaaacgtttacagaagtacccacaaca
gaatcatttcgatcagaagattgtttcagttgccaatctagattccctatattgaaaaat
cacaaaaacggtaatttgttaacaagttctcgttaccgctgcgaagattgtggagaggaa
ttctgtgtcgattgcgatgtgtttattcatgaaatacttcacaattgtcccggttgcgaa
tctaaacctgtaataacgtaa

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