Saccharomyces eubayanus: DI49_3898 Help Entry DI49_3898         CDS       T08138                                  Name (RefSeq) SKI2-like protein   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism seub  Saccharomyces eubayanus Pathway seub03018   RNA degradation Brite KEGG Orthology (KO) [BR:seub00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     DI49_3898  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:seub03019]     DI49_3898 Enzymes [BR:seub01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      DI49_3898 Messenger RNA biogenesis [BR:seub03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      DI49_3898   mRNA degradation factors    3'-5' decay     Ski complex      DI49_3898 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DSHCT Ski2_N DEAD Ski2_beta-barrel ResIII Helicase_C DEXQc_Suv3 MTR4-like_stalk MTR4_beta-barrel Motif Other DBs NCBI-GeneID:  28933035 NCBI-ProteinID:  XP_018220787 LinkDB All DBs Position XII:complement(888487..892350) Genome browser AA seq 1287 aa AA seqDB search MTKGFNTSSIQELYTSLKEITNGADVELFEDRITKLDFGSSDDLGHANDTIKDRFLKPSN VLPWSLLDMVQDVPKMNFLDDHSDKLDYKELLKIPNPINRTSYQFKRTGLEGKISGYKEE VNLKEIASANASNSLSITRSINHNQNSVRGSTAQLPFTPGGIPMKSVKKSSEQNGTSAMA NATKLLHKDGQGLFDIPDGMERGINPVDTVVENEDQNEELKELKQLDEIDNELDIKMEIY EAKVKSEESSDKTLSEEIIEEATEETTTNNAEDAEIDELLPIGIDFGRTKAISKNVTVKK EWAHVVDLNHKIENFDELIPNPARTWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVV AEYAIAMAHRNMTKTIYTSPIKALSNQKFRDFKETFNDVDIGLITGDVQINPDANCLIMT TEILRSMLYRGADLIRDVEFVIFDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPN TYEFANWIGRTKQKNIYVISTPKRPVPLEINIWTKKELIPVINPNSEFLDANFRKHKDIL NGDSTKGAPPKTDSGRGGSTAKGGRGGSNARGGRGGRGNSTRGGANRGGSRGAGAIGSNK RKFFTQDGPSKKTWPELVNYLRKKELLPMVVFVFSKKRCEEYADWLEGINFCNNKEKSQI HMFIEKSITRLKKEDRDLPQILKIRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLF ATETFAMGLNLPTRTVVFSSIRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTVIVMAY SSPLSITTFKEVTMGVPTRLQSQFRLTYNMILNLLRIEALRVEEMIKYSFSENAKETLQP EHEKQIKLLQGELQTIEYKSCEICDNDIERFLELMLKYKEATVNLMQEMVKSPSILHILK EGRLVAFRDTNDCLKLGFIFKVSLKDAVCVIMTFTKAFTLPNGKPNHLIYFPKADGYRKR NFPKFEKADFYMEEVPVTAIEVITKRKFAAPLGKVMKKDATALSEFKAEISNILEGKTLK EAINIEKQGLKIHQILLDRTNIRDEIFELKSIKCPGLSEHIVPRYKAHATENKIKELYHL MSDQNLSLLPDYEKRLAVLKDTGFIDENHNVLLKGRVACEINSGYELVLTELILDNFLGS FEPEEIVALLSVFVYEGKTREEEPPIVTPRLAKGKQKIEEIYKEMLGAFSTHQIPLTQDE AEFLDRKRFAMMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITWLDEICREVKTASIIIG NSTLHMKMSRAQELIKRDIVFAASLYL NT seq 3864 nt NT seq  +upstreamnt  +downstreamnt atgacgaagggatttaataccagctctatacaggaactatacacgtctttaaaggaaatc actaatggtgcagacgtggagcttttcgaagatcgtatcaccaaattagattttgggagc agtgacgatttaggacacgccaatgacaccataaaagacagatttttgaagccttcaaat gttcttccttggagtttattagatatggtccaagacgtcccaaaaatgaactttttagac gatcactctgataagttagactacaaggagctgttgaaaattcctaacccaatcaataga acatcatatcagttcaaaagaacaggcctagagggtaaaatttcaggctataaagaagag gtcaacttgaaggaaatcgctagtgccaatgcatcaaactcgctgtcaattaccagaagt atcaatcataaccaaaactcagtaagaggttccactgcgcaattacccttcactccaggc ggtatccccatgaaatccgtcaaaaaaagctcggaacaaaatggcacatcagcaatggcc aacgccaccaaactactgcacaaggatggtcaaggtttatttgacattccagatggcatg gaaagaggtatcaatccagtggataccgttgttgaaaatgaggatcaaaacgaagaattg aaagagttgaagcaacttgacgaaatagataatgaactagacatcaagatggagatatac gaagcaaaggtgaagtcggaggaaagctccgataaaacactttccgaagaaattatagag gaagctaccgaagaaacaacaactaataacgccgaagatgcagagatcgatgaactatta ccaattggtattgactttggcagaacaaaggcgatttctaagaatgtcaccgtaaagaag gaatgggctcatgttgtcgatttgaaccataaaattgaaaactttgacgaattaattcct aatcctgccaggacgtggccttttgaactggatacgttccagaaggaggccgtttatcat ctcgaacaaggtgactctgtttttgtcgcagcgcatacatctgctggtaaaactgtggtt gcagaatatgcgattgccatggcacacagaaatatgacgaagactatttacacatcacct atcaaagctttatctaatcaaaagttcagagactttaaggaaactttcaacgatgtcgat attgggttgattacgggtgatgtgcaaatcaatcctgatgcaaactgtttgattatgacc acagaaattttaaggtcgatgctttacaggggtgccgatcttataagagatgtagagttt gttatttttgacgaagtccactacgttaacgatcaagaccgtggtgttgtttgggaagaa gtaatcattatgcttcctcagcacgttaagtttatcttgttgtctgcgacggttccgaat acgtatgaattcgccaattggattggaagaacaaagcaaaaaaatatctacgtcatttct actcctaaaagacccgttccgttagaaataaatatatggaccaaaaaggagttaatacca gtgatcaatccaaactcagaatttctggacgccaatttcaggaaacacaaagatatctta aatggagacagtacaaagggagcccctccgaagacggatagtggaaggggaggctctaca gcaaaaggtggacgtgggggaagtaatgctcggggcggaaggggaggccgtggtaattcg acacgcggaggtgctaaccgtggtggctcaagaggtgctggcgcaattggctcgaataaa cgtaagtttttcacccaagacggtccttctaaaaaaacatggcctgaacttgttaactac ctaagaaagaaggaattgctacccatggttgttttcgtatttagtaaaaagagatgcgaa gaatatgctgattggcttgaagggattaacttctgtaacaataaggaaaagtcacaaatc catatgtttatcgaaaaatctattactcgtttaaaaaaagaagatagagatttgcctcaa attctcaaaatcagatccttgctggaacgtggtatagctgttcatcatggagggttgttg cctattgtcaaagaattgattgaaatcctattttctaaaggttttattaaagttttgttt gccacagaaacatttgccatgggtttgaacttacctacaaggactgttgtttttagcagt attcgtaagcatgacggcaatggactgagagaactaaccccaggagagttcactcaaatg gctggtagagccggtcggagaggtttagattctaccgggacagtcatcgtcatggcgtac agttctcctctatctatcactacattcaaagaagtaaccatgggtgttccaacaaggttg caatcccagtttagactaacatataatatgatcttgaatcttttgagaattgaagcattg agagtggaagaaatgattaaatattcttttagtgaaaatgctaaggaaactttacaacca gaacatgaaaaacaaattaagctattgcaaggagaattacaaactatagaatataagagc tgtgagatctgtgataatgatatcgaaaggtttttagaattaatgctaaagtacaaagag gcaacagtaaacctaatgcaagaaatggtcaaatctccttcaattctacatattctgaaa gaaggaagacttgttgcgtttagagatacaaacgattgtctcaaactagggtttatattt aaagtttcgttaaaggatgccgtttgtgttattatgacgttcacaaaagcatttacactt ccaaatggtaagccaaatcatttaatatactttccaaaagcagacgggtacagaaagagg aatttccccaagtttgagaaagccgatttttatatggaagaagtccctgtaaccgctata gaggtaatcacaaagcgcaaatttgccgctccattaggtaaggtaatgaagaaggatgcc accgctctaagtgaattcaaggccgaaatcagtaacattttagagggaaaaacactcaaa gaagcaatcaatattgaaaagcaaggtttgaaaattcatcaaatactgctagaccgtaca aacattagagatgagatatttgaactaaaaagcatcaaatgccctggtttgagcgaacat attgttccgaggtacaaggcacatgctaccgaaaacaagatcaaagagttgtatcattta atgtctgaccaaaacttaagtctactacctgattatgaaaagagactagctgttctaaaa gatactggatttatcgatgagaatcataatgtgttattaaaaggtagagtggcatgcgaa attaattctggttatgaactggttctaactgagttaattttggacaacttcttgggaagt tttgaacctgaagaaatagtcgccttactatcggtgtttgtttacgaagggaaaacaaga gaagaagaaccccccattgtcacaccaaggctagcaaagggtaaacaaaaaatcgaggag atttacaaggaaatgcttggtgcttttagtacacaccaaattcctttaactcaggatgaa gcggagttcttggataggaaaagatttgctatgatgaatgttgtgtatgaatgggctcgt ggtttatcgtttaaggaaattatggaaatgagccctgaagccgaaggtaccgtggtcaga gtcattacatggttggatgaaatttgtcgtgaagttaagactgcgtccattattattggt aattctacactacatatgaaaatgagcagagctcaagaattgatcaagagagatattgtt ttcgctgcaagcctgtacctgtaa

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