KEGG   Saccharomyces eubayanus: DI49_3989
Entry
DI49_3989         CDS       T08138                                 
Name
(RefSeq) NUP188-like protein
  KO
K14311  nuclear pore complex protein Nup188
Organism
seub  Saccharomyces eubayanus
Pathway
seub03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    DI49_3989
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:seub03019]
    DI49_3989
Messenger RNA biogenesis [BR:seub03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     DI49_3989
SSDB
Motif
Pfam: Nup188_N-subdom_III Nup188_N Nup188_C
Other DBs
NCBI-GeneID: 28933126
NCBI-ProteinID: XP_018219970
LinkDB
Position
XIII:complement(72474..77525)
AA seq 1683 aa
MLINVLNHSTKHNFSLAIPCRRQKKRTPPAMATHSIGNPAQELSFTYVANFINDAAADVS
AVDASQLAQIRQFLKTHKATLIQGVSQPKPDVVAPRGDNKLRSLIAHLLQINVDDDPSFA
HSEDPGLAAQLFISERSSKLHILYSLLVHPDIDPDVHSFFANDKFNIAERLISLIASIMQ
TYDTTTASVLEQGRIDDQDSVTLDSLVQLKNFSDLKLVLLILQILNLLILNTKVPVGIVN
QWFLQFQNQFVEFIRHVGSPEKTIDTSSSQFYKFQNFQDLSYLSKTLVSRISSLTAITTI
LMLGLNTAVAQFDLQSPLYSDSRTFETINAALENDLTTSIVNEDPVFHPMIHYAWSCILY
HRLALQQSESLEDPEIAKFAQFAESRNIFPELDTLAEVLSFDPTYTTIITVFLEFSLNFI
PITASTSHVFAKIVSKAPRQFIENFLTNDTFEDKLSILKAKLPLLNESLIPLINLSLIDT
EFANFELKDINSFAISKNSLNDLDYDLIADITASSSFSSSDIIIPDLIELKSDLLVSPPL
ERDNSNSLMSIPKSTKAKILSIKQQQQEDNGQQPPMTSNLIIFLYKYNGWSLVGRILQNL
LHSYTEKGTQLDHSHHELMISIIKLIANVVDPRTTLERSNEILSSLSSSLDTTSSALNNA
SIIQVIFEIFEISLQKKDYNLIVKCCEFLTMLTPNYPHLVSSYLNRSELLDKYGKTGLSN
MILGSVELSTGDYKFTIQLLKLTNIFIQESLSLQNSHISKRTKIDIINKLVLHAVHIFES
YYSWKYNDFLQKFEIAFHLTSIFYNVLHNVFTMNPSQKDQLITFPSANKLLQVFLTPMDS
IDLAPNTLMNILISPLDATTKILGDKILGNLYSRLMNNSFKLCKLLISIRGSNHDLKPSN
LEKLIFMNSSKLIDVYTLPNYVFLKAQIIELLSYLVEAPWNDEYPFLLSFLGESKSMKFL
EEVLSDLNSPVQNWGLLQNLYIFFTTLLESKQDGLSILFLTGQFASNKNSNDESSIDKNK
SILTVLQKNALLLDSMPEEVSCKLLETITYVLNTWTNSKIFIKDCKFVDILLNKLKNSKT
LFQKKENLTRDETIHLIKKYKLVSRIVEIFALYIYNSNDSNAKILSFLNQADLFELVSHF
FQIDGFDKTFHDDLNLKFQAQWPSLELKSFQKIPLSKINENENFGYDIQLLDLVLKNDPN
WCEPSINQNDFRKEIIDASLNLQYVNYEISTAKAWGALITTFVKRSPNPLSDSFIDLVAH
FLQLNIEFGSDKQLFTQIYLERIELAFYILYSFKLSGKSLNERKIVELLNKIFIIFKSDE
IDFIKMIGGSFKNNFYRPLLRSALILLELVTTGDHFIESVSDQLLEFFESVFSKGVYLIL
SNILCQINKCSTKSLNADHATQIANLEENTQDLLLLLSLFKKITDLSPSKKFNVILASSL
NEVGTLKVILNLYSSAHLVRINDEPVLGQITLTFISELCSIEQIADTFINSGLYTVLLES
PLSVAIQQGDIKPELSPRLHNIWSNGLLSIILLLLSQLGIKVLPETCLFVSYFGKQIKST
IYNWGDNKLAVSSSLIKETNQLVLLQKMLNLLNYQELLIESKNSDDKDRVVELVIGLDSD
YDKKRLSAALSKFLTHPKYLNSRIIPTTLEEQQLLEDEPKRLEFVKGISRDIRTLQDSLF
KGA
NT seq 5052 nt   +upstreamnt  +downstreamnt
atgcttataaacgtcttgaaccactcgacgaaacacaattttagcctagccatcccttgc
cgccgccagaagaaaaggactccaccagccatggctacacactcaattgggaatcccgct
caggaattatccttcacttacgtcgccaacttcatcaacgatgctgctgctgatgtttcc
gctgtggacgctagccaactggctcaaataagacagtttttgaagacgcataaggcaacg
ctcatccaaggtgtttcacagccaaagccggacgtagtcgcaccacgcggtgacaataaa
ctgcgctccttaatcgcacatttactgcagataaacgtcgatgatgatccgtcgtttgct
cactctgaggaccctggcctcgctgctcagctctttatatccgagaggtcgtccaaacta
cacatcctgtactcgcttctcgtccacccagatattgaccccgatgtacactctttcttt
gccaacgataagttcaacatagcggaaaggctgatctctttaatagcgtccatcatgcag
acgtacgacactaccacggcgtcggtcttggagcaaggccggatcgatgatcaagacagt
gtcacgttagattcactggttcaattgaagaatttctccgatttgaagcttgtgttgcta
atcctacagattttaaacttgctcatccttaatacaaaagtacccgtaggaatcgtcaac
caatggttccttcaatttcaaaatcaattcgtcgagtttatcagacacgtcggctctccg
gaaaaaaccatcgacacttcttcatcgcagttttataagtttcagaatttccaagacctg
agttacctttcaaaaacgcttgtttccagaatatcgtccctaacagcaatcacgaccatt
ttgatgctcgggcttaacaccgcagtagctcaatttgaccttcaatcacctttatattcc
gattcacgcactttcgaaaccatcaacgccgctttggaaaatgatttaacaaccagtatc
gtgaacgaagatcccgttttccatcccatgatccattatgcttggtcctgcatactctac
catagactagcattgcaacaatcagaatcattggaagatccagaaatagccaaatttgcg
caatttgccgaatcacgaaacattttccctgaattggacactttggcagaagtattatcg
tttgatcccacctacactaccatcattacagtttttttggaattctctttgaacttcatc
cctataacagcatccacttctcatgttttcgccaagatagtttcaaaggccccaaggcaa
tttattgaaaatttcttgacgaatgacacttttgaagacaaactaagcatcctaaaggct
aaattgccgctattaaacgaatcacttatccccttgataaatctatcattaatcgatacg
gaatttgccaatttcgaactgaaagatattaattcgttcgcgatctccaaaaatagctta
aacgacttggattacgatttgatagcagacataacagcatcatcttcgttttcctcttcg
gatatcattatacctgatttgatagaattgaaatccgatttgctagtatcgccccctcta
gaaagagataattccaatagtttaatgtcgataccgaaatctacaaaggccaaaatactt
tccatcaaacaacaacagcaagaagataatggccagcagccacctatgacttcaaacctg
atcatctttctttacaaatataacggttggtctctagtgggtagaatattacaaaatcta
ctacattcgtatacggaaaagggtacccaattggatcactcacaccatgaactgatgata
tccataataaaattaattgctaatgtcgtggatccaaggacaaccttggagagatcaaat
gaaatattatcaagcttgtcgagttctctagacactacaagcagcgctctaaataacgcg
tcgatcattcaagtaatttttgagattttcgaaatttcactacaaaagaaggattataat
ttaatagtgaagtgttgcgaatttctgacaatgctcacaccaaattacccccatttggtc
tcttcttatttgaatagatcagaactattggataaatacgggaagacaggtctttccaat
atgattcttggttcggttgaattatcaacaggcgattacaaatttactattcaattgctt
aaactaacaaacattttcattcaagaatccttatctctgcaaaacagtcatatctccaaa
aggactaaaattgatattatcaacaagctggtcctacatgcagtccatatttttgaaagc
tattacagttggaaatataatgacttcctacaaaaattcgaaatcgccttccatttgact
tcgattttttataatgtgcttcacaacgttttcaccatgaatccatctcaaaaggatcaa
ctgattacttttccctcagcaaataaactgttgcaggtatttctaactcctatggactcc
atcgacttggccccaaatactctgatgaatattctcatttcgccattggatgccacaact
aagattttgggagacaagatcttaggcaacctatattccagattgatgaataactctttt
aagttatgcaaactcttgatttccatcagaggtagtaatcatgacctaaaaccaagcaac
ctggaaaaactgattttcatgaactcctcaaaattgatcgacgtttacactttaccaaat
tacgtttttctgaaagctcaaatcatagaactactaagttatttggtggaagcgccttgg
aatgacgaatatccgtttttgttatccttcttgggagaatctaagtcaatgaaattttta
gaagaggtcctatctgatttgaattctcctgtacaaaattggggccttttacaaaatctt
tacattttcttcacgactttactagagagcaaacaagatgggttatcaattcttttctta
accggccaatttgcctctaacaaaaacagtaatgatgaatcgtccatagataagaacaaa
tcaattttaactgttttacaaaaaaatgctctactgctagactcgatgcccgaagaggtc
agttgtaaacttttggaaacaatcacatatgttttaaacacttggacaaattctaaaatt
ttcatcaaagactgcaaattcgtggatatcttattgaacaaattgaagaactccaaaact
ttgttccaaaagaaagaaaatttgactcgtgatgagactattcatcttattaagaaatac
aaattagtctcgagaattgtagaaatttttgcattgtacatttataactcaaacgattca
aatgcaaaaattctaagctttttgaaccaagcagatttatttgagctagtcagtcatttt
ttccaaattgatgggttcgataaaacgtttcatgatgatttgaatctcaaatttcaagct
caatggcctagtctggaattaaaatcatttcaaaaaattcccttgtcaaaaataaatgaa
aacgagaatttcggttacgatattcaattattagatctagtattgaaaaatgaccctaat
tggtgcgaacctagcatcaaccagaacgattttagaaaagaaatcatcgatgcttcatta
aatttacagtatgtgaattacgaaatatctactgcaaaggcttggggtgcgttaatcacc
acatttgttaagaggagcccaaatccactaagtgatagctttattgacctagtggcgcat
ttcttacaattgaatattgaatttggttcagacaaacagctatttactcaaatatatttg
gaaaggattgaattggcgttttatatcttgtattctttcaagctatcagggaagtcactg
aatgaaaggaaaatagttgaactattaaacaagatttttataattttcaaatctgatgaa
attgattttataaagatgattggcggatctttcaaaaacaatttctatagacctctatta
agatccgccctaatccttttagagttggtcactacgggtgatcattttatcgagtcagta
tctgatcaattattggagttttttgaatcggtattcagcaaaggtgtttacttgatacta
tctaacatcttatgccagattaataagtgctctacaaagagcctaaatgcggaccatgcc
acacagattgccaacttggaggaaaatactcaagatttacttttattactatcgctgttc
aagaaaatcacggatttgagtccttctaagaaattcaatgttatcttagcatcatcttta
aatgaggtagggactttgaaagtaattttaaacttatattcaagcgcacatttggttaga
attaatgatgaaccagtgcttgggcaaattactttgacttttatctctgaattgtgttcg
attgaacaaattgccgatacatttatcaatagtggactgtatactgttttactggaaagc
ccactgtcggtggctatacagcagggagatatcaaacctgaattatcgcccagactacat
aacatttggagcaatggtctgttgtctatcatcctattgttattgagtcaattaggcatc
aaggttttacctgagacttgcctctttgtctcatattttggcaaacaaatcaaatcaaca
atatacaattggggcgataacaaattagcggtatcaagctcattgataaaggaaaccaat
caattggttttgttacagaaaatgttaaacttactaaactatcaagaactgttaattgaa
tctaagaactctgatgataaggatagagtcgtagaactagtcattggtttagattcggat
tatgataagaaaagattaagtgcagcactaagcaaattcttgacgcatccaaagtatttg
aattcgagaataatacccaccactctggaagagcaacagcttttggaagatgaaccaaag
agactggaattcgtcaagggtataagcagagatattagaacattgcaagattcgctattc
aagggcgcttga

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