Saccharomyces eubayanus: DI49_3989
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Entry
DI49_3989 CDS
T08138
Name
(RefSeq) NUP188-like protein
KO
K14311
nuclear pore complex protein Nup188
Organism
seub
Saccharomyces eubayanus
Pathway
seub03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DI49_3989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_3989
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
DI49_3989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_C
Motif
Other DBs
NCBI-GeneID:
28933126
NCBI-ProteinID:
XP_018219970
LinkDB
All DBs
Position
XIII:complement(72474..77525)
Genome browser
AA seq
1683 aa
AA seq
DB search
MLINVLNHSTKHNFSLAIPCRRQKKRTPPAMATHSIGNPAQELSFTYVANFINDAAADVS
AVDASQLAQIRQFLKTHKATLIQGVSQPKPDVVAPRGDNKLRSLIAHLLQINVDDDPSFA
HSEDPGLAAQLFISERSSKLHILYSLLVHPDIDPDVHSFFANDKFNIAERLISLIASIMQ
TYDTTTASVLEQGRIDDQDSVTLDSLVQLKNFSDLKLVLLILQILNLLILNTKVPVGIVN
QWFLQFQNQFVEFIRHVGSPEKTIDTSSSQFYKFQNFQDLSYLSKTLVSRISSLTAITTI
LMLGLNTAVAQFDLQSPLYSDSRTFETINAALENDLTTSIVNEDPVFHPMIHYAWSCILY
HRLALQQSESLEDPEIAKFAQFAESRNIFPELDTLAEVLSFDPTYTTIITVFLEFSLNFI
PITASTSHVFAKIVSKAPRQFIENFLTNDTFEDKLSILKAKLPLLNESLIPLINLSLIDT
EFANFELKDINSFAISKNSLNDLDYDLIADITASSSFSSSDIIIPDLIELKSDLLVSPPL
ERDNSNSLMSIPKSTKAKILSIKQQQQEDNGQQPPMTSNLIIFLYKYNGWSLVGRILQNL
LHSYTEKGTQLDHSHHELMISIIKLIANVVDPRTTLERSNEILSSLSSSLDTTSSALNNA
SIIQVIFEIFEISLQKKDYNLIVKCCEFLTMLTPNYPHLVSSYLNRSELLDKYGKTGLSN
MILGSVELSTGDYKFTIQLLKLTNIFIQESLSLQNSHISKRTKIDIINKLVLHAVHIFES
YYSWKYNDFLQKFEIAFHLTSIFYNVLHNVFTMNPSQKDQLITFPSANKLLQVFLTPMDS
IDLAPNTLMNILISPLDATTKILGDKILGNLYSRLMNNSFKLCKLLISIRGSNHDLKPSN
LEKLIFMNSSKLIDVYTLPNYVFLKAQIIELLSYLVEAPWNDEYPFLLSFLGESKSMKFL
EEVLSDLNSPVQNWGLLQNLYIFFTTLLESKQDGLSILFLTGQFASNKNSNDESSIDKNK
SILTVLQKNALLLDSMPEEVSCKLLETITYVLNTWTNSKIFIKDCKFVDILLNKLKNSKT
LFQKKENLTRDETIHLIKKYKLVSRIVEIFALYIYNSNDSNAKILSFLNQADLFELVSHF
FQIDGFDKTFHDDLNLKFQAQWPSLELKSFQKIPLSKINENENFGYDIQLLDLVLKNDPN
WCEPSINQNDFRKEIIDASLNLQYVNYEISTAKAWGALITTFVKRSPNPLSDSFIDLVAH
FLQLNIEFGSDKQLFTQIYLERIELAFYILYSFKLSGKSLNERKIVELLNKIFIIFKSDE
IDFIKMIGGSFKNNFYRPLLRSALILLELVTTGDHFIESVSDQLLEFFESVFSKGVYLIL
SNILCQINKCSTKSLNADHATQIANLEENTQDLLLLLSLFKKITDLSPSKKFNVILASSL
NEVGTLKVILNLYSSAHLVRINDEPVLGQITLTFISELCSIEQIADTFINSGLYTVLLES
PLSVAIQQGDIKPELSPRLHNIWSNGLLSIILLLLSQLGIKVLPETCLFVSYFGKQIKST
IYNWGDNKLAVSSSLIKETNQLVLLQKMLNLLNYQELLIESKNSDDKDRVVELVIGLDSD
YDKKRLSAALSKFLTHPKYLNSRIIPTTLEEQQLLEDEPKRLEFVKGISRDIRTLQDSLF
KGA
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgcttataaacgtcttgaaccactcgacgaaacacaattttagcctagccatcccttgc
cgccgccagaagaaaaggactccaccagccatggctacacactcaattgggaatcccgct
caggaattatccttcacttacgtcgccaacttcatcaacgatgctgctgctgatgtttcc
gctgtggacgctagccaactggctcaaataagacagtttttgaagacgcataaggcaacg
ctcatccaaggtgtttcacagccaaagccggacgtagtcgcaccacgcggtgacaataaa
ctgcgctccttaatcgcacatttactgcagataaacgtcgatgatgatccgtcgtttgct
cactctgaggaccctggcctcgctgctcagctctttatatccgagaggtcgtccaaacta
cacatcctgtactcgcttctcgtccacccagatattgaccccgatgtacactctttcttt
gccaacgataagttcaacatagcggaaaggctgatctctttaatagcgtccatcatgcag
acgtacgacactaccacggcgtcggtcttggagcaaggccggatcgatgatcaagacagt
gtcacgttagattcactggttcaattgaagaatttctccgatttgaagcttgtgttgcta
atcctacagattttaaacttgctcatccttaatacaaaagtacccgtaggaatcgtcaac
caatggttccttcaatttcaaaatcaattcgtcgagtttatcagacacgtcggctctccg
gaaaaaaccatcgacacttcttcatcgcagttttataagtttcagaatttccaagacctg
agttacctttcaaaaacgcttgtttccagaatatcgtccctaacagcaatcacgaccatt
ttgatgctcgggcttaacaccgcagtagctcaatttgaccttcaatcacctttatattcc
gattcacgcactttcgaaaccatcaacgccgctttggaaaatgatttaacaaccagtatc
gtgaacgaagatcccgttttccatcccatgatccattatgcttggtcctgcatactctac
catagactagcattgcaacaatcagaatcattggaagatccagaaatagccaaatttgcg
caatttgccgaatcacgaaacattttccctgaattggacactttggcagaagtattatcg
tttgatcccacctacactaccatcattacagtttttttggaattctctttgaacttcatc
cctataacagcatccacttctcatgttttcgccaagatagtttcaaaggccccaaggcaa
tttattgaaaatttcttgacgaatgacacttttgaagacaaactaagcatcctaaaggct
aaattgccgctattaaacgaatcacttatccccttgataaatctatcattaatcgatacg
gaatttgccaatttcgaactgaaagatattaattcgttcgcgatctccaaaaatagctta
aacgacttggattacgatttgatagcagacataacagcatcatcttcgttttcctcttcg
gatatcattatacctgatttgatagaattgaaatccgatttgctagtatcgccccctcta
gaaagagataattccaatagtttaatgtcgataccgaaatctacaaaggccaaaatactt
tccatcaaacaacaacagcaagaagataatggccagcagccacctatgacttcaaacctg
atcatctttctttacaaatataacggttggtctctagtgggtagaatattacaaaatcta
ctacattcgtatacggaaaagggtacccaattggatcactcacaccatgaactgatgata
tccataataaaattaattgctaatgtcgtggatccaaggacaaccttggagagatcaaat
gaaatattatcaagcttgtcgagttctctagacactacaagcagcgctctaaataacgcg
tcgatcattcaagtaatttttgagattttcgaaatttcactacaaaagaaggattataat
ttaatagtgaagtgttgcgaatttctgacaatgctcacaccaaattacccccatttggtc
tcttcttatttgaatagatcagaactattggataaatacgggaagacaggtctttccaat
atgattcttggttcggttgaattatcaacaggcgattacaaatttactattcaattgctt
aaactaacaaacattttcattcaagaatccttatctctgcaaaacagtcatatctccaaa
aggactaaaattgatattatcaacaagctggtcctacatgcagtccatatttttgaaagc
tattacagttggaaatataatgacttcctacaaaaattcgaaatcgccttccatttgact
tcgattttttataatgtgcttcacaacgttttcaccatgaatccatctcaaaaggatcaa
ctgattacttttccctcagcaaataaactgttgcaggtatttctaactcctatggactcc
atcgacttggccccaaatactctgatgaatattctcatttcgccattggatgccacaact
aagattttgggagacaagatcttaggcaacctatattccagattgatgaataactctttt
aagttatgcaaactcttgatttccatcagaggtagtaatcatgacctaaaaccaagcaac
ctggaaaaactgattttcatgaactcctcaaaattgatcgacgtttacactttaccaaat
tacgtttttctgaaagctcaaatcatagaactactaagttatttggtggaagcgccttgg
aatgacgaatatccgtttttgttatccttcttgggagaatctaagtcaatgaaattttta
gaagaggtcctatctgatttgaattctcctgtacaaaattggggccttttacaaaatctt
tacattttcttcacgactttactagagagcaaacaagatgggttatcaattcttttctta
accggccaatttgcctctaacaaaaacagtaatgatgaatcgtccatagataagaacaaa
tcaattttaactgttttacaaaaaaatgctctactgctagactcgatgcccgaagaggtc
agttgtaaacttttggaaacaatcacatatgttttaaacacttggacaaattctaaaatt
ttcatcaaagactgcaaattcgtggatatcttattgaacaaattgaagaactccaaaact
ttgttccaaaagaaagaaaatttgactcgtgatgagactattcatcttattaagaaatac
aaattagtctcgagaattgtagaaatttttgcattgtacatttataactcaaacgattca
aatgcaaaaattctaagctttttgaaccaagcagatttatttgagctagtcagtcatttt
ttccaaattgatgggttcgataaaacgtttcatgatgatttgaatctcaaatttcaagct
caatggcctagtctggaattaaaatcatttcaaaaaattcccttgtcaaaaataaatgaa
aacgagaatttcggttacgatattcaattattagatctagtattgaaaaatgaccctaat
tggtgcgaacctagcatcaaccagaacgattttagaaaagaaatcatcgatgcttcatta
aatttacagtatgtgaattacgaaatatctactgcaaaggcttggggtgcgttaatcacc
acatttgttaagaggagcccaaatccactaagtgatagctttattgacctagtggcgcat
ttcttacaattgaatattgaatttggttcagacaaacagctatttactcaaatatatttg
gaaaggattgaattggcgttttatatcttgtattctttcaagctatcagggaagtcactg
aatgaaaggaaaatagttgaactattaaacaagatttttataattttcaaatctgatgaa
attgattttataaagatgattggcggatctttcaaaaacaatttctatagacctctatta
agatccgccctaatccttttagagttggtcactacgggtgatcattttatcgagtcagta
tctgatcaattattggagttttttgaatcggtattcagcaaaggtgtttacttgatacta
tctaacatcttatgccagattaataagtgctctacaaagagcctaaatgcggaccatgcc
acacagattgccaacttggaggaaaatactcaagatttacttttattactatcgctgttc
aagaaaatcacggatttgagtccttctaagaaattcaatgttatcttagcatcatcttta
aatgaggtagggactttgaaagtaattttaaacttatattcaagcgcacatttggttaga
attaatgatgaaccagtgcttgggcaaattactttgacttttatctctgaattgtgttcg
attgaacaaattgccgatacatttatcaatagtggactgtatactgttttactggaaagc
ccactgtcggtggctatacagcagggagatatcaaacctgaattatcgcccagactacat
aacatttggagcaatggtctgttgtctatcatcctattgttattgagtcaattaggcatc
aaggttttacctgagacttgcctctttgtctcatattttggcaaacaaatcaaatcaaca
atatacaattggggcgataacaaattagcggtatcaagctcattgataaaggaaaccaat
caattggttttgttacagaaaatgttaaacttactaaactatcaagaactgttaattgaa
tctaagaactctgatgataaggatagagtcgtagaactagtcattggtttagattcggat
tatgataagaaaagattaagtgcagcactaagcaaattcttgacgcatccaaagtatttg
aattcgagaataatacccaccactctggaagagcaacagcttttggaagatgaaccaaag
agactggaattcgtcaagggtataagcagagatattagaacattgcaagattcgctattc
aagggcgcttga
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