KEGG   Saccharomyces eubayanus: DI49_4043
Entry
DI49_4043         CDS       T08138                                 
Name
(RefSeq) RSE1-like protein
  KO
K12830  splicing factor 3B subunit 3
Organism
seub  Saccharomyces eubayanus
Pathway
seub03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DI49_4043
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:seub03021]
    DI49_4043
   03041 Spliceosome [BR:seub03041]
    DI49_4043
   03036 Chromosome and associated proteins [BR:seub03036]
    DI49_4043
Transcription machinery [BR:seub03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     DI49_4043
Spliceosome [BR:seub03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    DI49_4043
 Complex B
    DI49_4043
 Complex C
   U2 SnRNP specific factors
    DI49_4043
Chromosome and associated proteins [BR:seub03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     DI49_4043
    TFTC complex
     DI49_4043
SSDB
Motif
Pfam: Beta-prop_RSE1_1st CPSF_A Beta-prop_RSE1_2nd BBS2_N
Other DBs
NCBI-GeneID: 28933180
NCBI-ProteinID: XP_018220022
LinkDB
Position
XIII:complement(186595..190668)
AA seq 1357 aa
MWGGGKTAIVGLSPHTAEMRLLYEQATTTMSCSSLNEGLEQNRIGSERKTTMAARDNELY
LYHLTLQKQTNFVHSCIGHFVDLDAGSNNGQSQLCVATETHLELYDTAEGELTLITRFQN
LFTTITSMRSLDLPHAGSTANSSNCPTFLVLTSDSGNLSIVQITRHAGAFKLRTLVNQPL
TRTTLRRASPISYMEVDPNGRCIILSSVEQNKLCFLVDFARELRISSPLEIIRPHMITLD
MTACDVNFNNPCFIALEMDSMAASLSVHLIFYVLELGLNHIVKKADYSVNPSANFILSLP
DLSKYNITTSLNDNNYDRDEDSLFNPFVVIGFENHILIKDMNGFYSLKVQIPQRAAASNP
QKSVTIISGIVQKLKNDFFVLLQSNYGDLFKLTITPDINDRNRPLVKLSYFDTIQNSNQL
HIFKNGYLFALSEMNNNFLFQFEKLGVENDLSKILTSKDPNKPLVFQPSTNLQNLSILSQ
QLNLNPLGSSQISNDSPLSIVTQHHTNSKLLTLTSGVNYSNLISTNLPPNATKLWLIPHP
AATNNNNNLLFISFPKKTMILQIDNESMEELTPDEVARSTFKLSQDTTIHTCLMSSHSII
QVCTTELRQIVPIDKTGFSNKLTWVPPAGIRIICATSSKTQLIVSLSNYELVYFKIDSSS
NSLIELTTHPELDTLPCKLAVEQDSQHSDLLAIADDEGMIKIMSLRDQKEDFLTVISLQL
VNEKVSDMIMVRDPLTRLLNLHVGLVNGVYMRFHIQEIDGLFTDIKRRFLGLKPVVLSYL
NKISMSLNEEEEEEKEEEEEEEEDGNEKKWISCVVCHSASTWVSYTWNNMWNIRPLNGQN
MLSCSKFVNADVQINGVCSISNSGHLNIGQVSGFPTWEKWFHVDEVSIEEQGDKKEDDAG
EESEEDDEDDEEETLKISTFQPRTILSFPNKPKHALFIENHTEVPQCRISLKINDDCIKH
ANSDRSFKLLDNVHCISATIIDFGKKVDHLVISTKDNRLMTYQVLVNKDKSSFDIELLHQ
TKTLSQIHSMLKFKNHLLAAIDSTIILYGLGKKQLLRRSVTETPVSITKIVSMDQWNYER
LAVGDIHESVTLFIWNPTGNVFIPMVDDSIKRHVTTLKFLDEATIIGADKFGNAWTLRCP
SECENIISSHEASELSDGTIKYPLNLINLQQRLPNTYDCKFKFDVLNHLYVNDIIINFHI
LDSISNSDRPGCIYMGLQGTIGCFIPLLSKGNVMTMKKIEKIMSEADDTFYMEYESRKKN
NNMHSEDDEEEPASVVLHRRGDIIDGTICEGSYSIVGRDHQSYRSYYAPVRKVIDGDLCE
NFLRLSLNEQEFLAKDLKNIQINDIIQRINEVRTNYL
NT seq 4074 nt   +upstreamnt  +downstreamnt
atgtggggaggtggcaaaacggcaatagtaggattgtcgccccacacggcagagatgcgt
ctgctatatgagcaagccacgacgacgatgagctgtagtagtttaaacgagggattggaa
caaaacagaataggcagtgagcgcaagacaaccatggctgctagagataatgagctgtac
ttgtaccatctgacgttgcagaagcagacgaatttcgtgcactcgtgtattggccacttc
gtggacctggacgcagggtccaataatggccagtcgcaactgtgcgttgccactgagacg
cacttagagctctatgacacggcggaaggggagctgacactgattaccaggttccagaac
ctgttcacgacgataacatcgatgaggtcgttggacttgccgcatgccgggtccacggcg
aattcttccaattgccccactttcctagtgttgacatcagactctggtaatttaagcatt
gtgcagatcactaggcatgcaggcgcgttcaaattaaggacgttggtgaaccagccgttg
accaggaccactctgcggagggcctctccaatttcgtacatggaagttgaccctaatggg
cgttgtataatcctgtcgtctgtagaacagaacaaactatgctttcttgtggactttgca
cgagaactaaggatctcgtcgcccttagagatcatcagacctcatatgatcacgttagat
atgaccgcatgcgatgtgaatttcaacaacccgtgctttattgccttggaaatggacagc
atggctgcttcactctcggtacatttgatattttacgttttggagttggggttgaaccat
attgttaagaaagctgattattcagtcaatccgtctgctaatttcattttgagtttaccg
gatttgtcgaagtataatataacaacctctctgaatgataataactacgatcgtgacgaa
gactctttgttyaatccctttgttgtaattggatttgaaaatcatatactgatcaaggac
atgaacggtttctatagtttgaaagtacaaataccacaaagggccgctgcaagcaacccc
cagaaatctgtaacgatcatctcaggtattgtacagaagcttaaaaatgacttcttcgta
ctcctgcaatctaactacggtgatctttttaaattaaccataactccggacattaatgat
agaaatagacctttggttaaattgagctattttgatacaatccaaaattccaaccaatta
cacatttttaaaaacggttatctttttgcactatctgaaatgaataacaactttcttttc
cagtttgaaaaactaggtgtagagaatgacctctccaagattctaacctcaaaagatcca
aataaaccgctggttttccaaccatctaccaacctgcagaatttgagtatcttgtcccaa
cagttaaatttgaacccattaggtagctcccagatttcgaatgactcgcctttatctatc
gttactcaacatcacacaaacagtaagctattaaccttaacaagcggtgtaaattactct
aacctgatctccactaatttgccacccaacgcaacaaaattgtggttgatacctcatcct
gcagccactaacaataacaacaacctcttgttcattagtttccctaaaaagacgatgata
ttacaaattgacaacgagtctatggaagaattaacccctgatgaagttgcacgttcgact
ttcaaactatctcaggacacgacgattcatacctgtttgatgagctcacattctattatt
caggtatgcactacagaattgagacagattgtaccaattgataaaaccgggttctctaat
aaattgacatgggtgcctccagcaggtattcgtattatatgcgctacatcttcaaaaacc
caattgatcgtatcactatcaaactacgagctagtctatttcaagatagatagttcctcg
aactcattgattgagctgactacacatccggaattggacacattgccttgtaaacttgcc
gtcgagcaggatagccagcatagtgatttattagccatcgctgatgatgaaggtatgatc
aaaataatgtctcttagagatcaaaaggaagatttcttaacagtaataagtttgcagttg
gttaacgaaaaagtctctgacatgatcatggttagagatcccttaactagattgctaaat
ttgcatgttggtttagtgaatggtgtctacatgagatttcacatacaagaaattgatgga
ttgtttactgatataaaaagacgatttcttggtttgaaacccgttgtactgtcatatctg
aataagatatctatgtccctaaatgaagaggaagaggaagagaaagaggaagaggaagag
gaagaggaagatggaaatgaaaaaaaatggatttcatgcgttgtttgccattccgcttct
acgtgggtaagctacacgtggaataacatgtggaatatacggccattaaacggccaaaac
atgttaagctgctccaaatttgttaacgcagacgtacaaataaacggtgtttgttcgatt
tctaactcagggcatttaaacatcggccaggtttccggttttccaacgtgggagaagtgg
tttcatgtggatgaagtaagtatcgaggaacaaggggacaagaaagaggatgatgctggt
gaagaaagcgaagaagatgatgaagacgacgaggaagaaacattaaaaatatccacattc
caacctcgtactattttgtccttccccaataaaccgaaacatgctttgttcatcgagaat
cataccgaagtaccacaatgccgtatatcattaaaaatcaatgacgattgcataaagcac
gcaaattcagatcgctcatttaaactattagacaatgtgcattgcatctccgccacgata
atagacttcgggaaaaaggtcgaccaccttgtaatctctactaaagacaatagattgatg
acataccaagtattggtaaataaggacaaatcatctttcgacattgaattacttcatcaa
acaaaaactttatcacaaatacattccatgctgaaatttaagaatcatttgctggccgcc
atagattccactattatcctgtatggcttaggtaaaaaacaattacttagaagatctgta
accgaaacaccagtatcaataactaaaattgtatctatggatcagtggaattacgaaagg
ttggctgttggggatatacatgaatctgtcacgctatttatttggaatcccacagggaat
gtttttattccaatggtggacgactccattaaacgtcatgtaacaactttaaaatttttg
gacgaggcaacaattattggtgccgataagtttggaaatgcctggactttaagatgcccg
tcagagtgcgagaacatcatatcaagtcatgaggctagtgaattatcagacggtaccatc
aagtacccattgaatttgatcaatttacaacagaggttacctaatacgtatgattgcaaa
ttcaagtttgatgtactaaaccacctctacgttaatgatatcatcataaattttcatatt
ttggacagcatctcaaattctgataggccaggttgtatctatatgggtttacaaggtact
attgggtgctttattccattattatccaaggggaatgttatgaccatgaaaaagatcgag
aaaataatgtcagaggctgatgatacattttatatggagtatgaatcaagaaaaaaaaat
aataatatgcacagtgaagatgacgaagaggaacccgccagtgtcgtgttacacaggcga
ggtgatataattgatggaacgatatgcgaaggatcgtattccattgtaggcagagatcat
caaagctatagaagttattatgctcctgtgcgtaaggttatcgacggtgacctatgtgaa
aatttcttgagactttcactaaacgaacaagaatttttggccaaagatctgaaaaatatt
caaatcaatgatataattcaaaggataaatgaagttagaacaaattatctttag

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