KEGG   Saccharomyces eubayanus: DI49_4058
Entry
DI49_4058         CDS       T08138                                 
Name
(RefSeq) NDC1-like protein
  KO
K14315  nucleoporin NDC1
Organism
seub  Saccharomyces eubayanus
Pathway
seub03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    DI49_4058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:seub03019]
    DI49_4058
Messenger RNA biogenesis [BR:seub03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     DI49_4058
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 28933195
NCBI-ProteinID: XP_018220035
LinkDB
Position
XIII:214597..216576
AA seq 659 aa
MIQTPRELLNPRYTYHAIFSDVCKTRFNHLVTRLFFICSIIQSVCISLLALPHLPFWELA
LAFIPNLLILNLVSLLIIVTRKNYMHVKNFGFANSFTFALGQLLSMKFLVYQVVYTFGSF
LLSLVLSTVFGRGGSGSRPYYRLFIWIIIPTIYNLQHQFTDADKLSFNCENFFQAPQDYV
LERLKKIFGKSLILSVASLFVLPISTTIVFSSTTPGLFVSFTSGVASIIRLLMISCIIFI
TFEFINIAFDAHMSIGCLHKGKLISNLSSTPMGTLLSGLSSDKPFTKLTAYQELAYRATS
LDPSLRAPIYSSKFRNNNGNTWSLILKECLKVIQENNETVMLYLRSIQDLSDSTSAMHHK
KVDNLDYMYENGKLTSANERLFGNRPSMMAPLRNSDPLNESPNKLRVRTDDSVLLNRGNK
KRPTSTYLQNDIDEARQTFNGSIFTHETTLMTAVRLICKKLKNSIMSFVFPSYAERQSYD
EDNNYKTLPDKKHNSNRGQISVIDIWSISKKRQAEKLIPLPICHANSVVALTGLLIKSRT
EDPKGGIIASVGDILKTLERSICALGEFADWDPESMAYNAAIQAQKTAQDRVQQDSEDED
GMKDTADMISVLYQLSTSAFMEIVLEYNVALNDVYLDADVAKLANWFLEVYTTGAPAAI
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgatacagacgcctagggagttgctgaatccacggtacacgtaccacgctatcttcagc
gacgtgtgcaagacccggttcaaccatttggtaacgagactgttttttatatgctcaatc
atccagagtgtgtgtatttcactgctggctttgcctcacttgcccttttgggagctggcg
ttggcattcattcccaacctgctgattcttaatctggtttccctattgattattgtgacg
aggaaaaattacatgcacgtgaagaattttgggtttgccaattcatttactttcgcgctg
ggccaattgttgtcgatgaagtttcttgtataccaagttgtttacactttcggcagtttt
cttttgtcgttggttttgagcacggtctttggacgtggaggctctggctctaggccatac
tacaggctgtttatctggataattatacccacgatctataatctgcaacatcaattcact
gatgctgacaagttatctttcaactgtgaaaacttctttcaagctccgcaagactacgta
ttggagcgactcaagaaaatttttgggaagtcactaatcctaagtgtagccagtttgttc
gtattgccgatctccaccacaattgttttctctagcacgacaccagggttatttgtttca
tttacgagtggcgtggcatctatcataaggctgctgatgatctcctgcattatcttcatc
actttcgagttcatcaatatagcatttgacgcacatatgtccattggttgtttgcataag
ggcaaactaatttcgaatctatcgtccacccccatgggaactctgttaagcggactttct
tcggataagccgtttaccaagttgactgcttaccaagagttagcatatagagcaacatcg
ctagatccatcattgcgagcaccaatatatagttccaaattcagaaacaataatggtaac
acgtggtcgttgattcttaaggaatgcctgaaggtcatccaggaaaataacgagacagta
atgctgtacctaagatccatacaggatcttagcgactccacaagcgctatgcatcacaaa
aaagtggacaacctagattatatgtatgagaatgggaagttgactagtgccaacgaaagg
ctttttggtaaccgaccttcaatgatggctccattgagaaatagtgatccgttgaatgaa
tcaccaaataagttaagagttagaacagatgacagtgtgctacttaaccgcggaaacaaa
aaaaggcccacttctacgtatttgcaaaatgacatagatgaagctagacagactttcaat
ggctctatattcacccacgagacgacattaatgactgctgtacgtcttatatgcaagaaa
ttaaagaactcgataatgtcatttgttttcccctcatacgcagaaaggcaatcttatgac
gaagataataactacaaaacattgccagataagaaacacaactccaacaggggccagatt
tcagtaattgatatatggtccatttccaagaaaagacaggctgaaaagctgattccacta
cccatatgccacgccaatagtgtggtagcactcacaggactgctgatcaaatcaagaaca
gaggacccgaagggtggcatcattgcatctgtcggtgatatccttaagactttagaaagg
tctatttgtgcgttgggtgagttcgccgattgggacccagaatccatggcgtacaacgct
gctatccaggcacaaaaaactgctcaagacagagtccaacaggacagcgaggacgaagat
ggcatgaaggacacggcggacatgataagcgttctttaccaactgtccacgagcgcgttt
atggagatagtgctcgagtacaacgtcgcattgaatgatgtctacttagatgcagatgtg
gctaaactagccaactggtttctagaagtgtacaccactggcgcacccgcagctatataa

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