Saccharomyces eubayanus: DI49_4058
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Entry
DI49_4058 CDS
T08138
Name
(RefSeq) NDC1-like protein
KO
K14315
nucleoporin NDC1
Organism
seub
Saccharomyces eubayanus
Pathway
seub03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DI49_4058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_4058
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
DI49_4058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
28933195
NCBI-ProteinID:
XP_018220035
LinkDB
All DBs
Position
XIII:214597..216576
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AA seq
659 aa
AA seq
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MIQTPRELLNPRYTYHAIFSDVCKTRFNHLVTRLFFICSIIQSVCISLLALPHLPFWELA
LAFIPNLLILNLVSLLIIVTRKNYMHVKNFGFANSFTFALGQLLSMKFLVYQVVYTFGSF
LLSLVLSTVFGRGGSGSRPYYRLFIWIIIPTIYNLQHQFTDADKLSFNCENFFQAPQDYV
LERLKKIFGKSLILSVASLFVLPISTTIVFSSTTPGLFVSFTSGVASIIRLLMISCIIFI
TFEFINIAFDAHMSIGCLHKGKLISNLSSTPMGTLLSGLSSDKPFTKLTAYQELAYRATS
LDPSLRAPIYSSKFRNNNGNTWSLILKECLKVIQENNETVMLYLRSIQDLSDSTSAMHHK
KVDNLDYMYENGKLTSANERLFGNRPSMMAPLRNSDPLNESPNKLRVRTDDSVLLNRGNK
KRPTSTYLQNDIDEARQTFNGSIFTHETTLMTAVRLICKKLKNSIMSFVFPSYAERQSYD
EDNNYKTLPDKKHNSNRGQISVIDIWSISKKRQAEKLIPLPICHANSVVALTGLLIKSRT
EDPKGGIIASVGDILKTLERSICALGEFADWDPESMAYNAAIQAQKTAQDRVQQDSEDED
GMKDTADMISVLYQLSTSAFMEIVLEYNVALNDVYLDADVAKLANWFLEVYTTGAPAAI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgatacagacgcctagggagttgctgaatccacggtacacgtaccacgctatcttcagc
gacgtgtgcaagacccggttcaaccatttggtaacgagactgttttttatatgctcaatc
atccagagtgtgtgtatttcactgctggctttgcctcacttgcccttttgggagctggcg
ttggcattcattcccaacctgctgattcttaatctggtttccctattgattattgtgacg
aggaaaaattacatgcacgtgaagaattttgggtttgccaattcatttactttcgcgctg
ggccaattgttgtcgatgaagtttcttgtataccaagttgtttacactttcggcagtttt
cttttgtcgttggttttgagcacggtctttggacgtggaggctctggctctaggccatac
tacaggctgtttatctggataattatacccacgatctataatctgcaacatcaattcact
gatgctgacaagttatctttcaactgtgaaaacttctttcaagctccgcaagactacgta
ttggagcgactcaagaaaatttttgggaagtcactaatcctaagtgtagccagtttgttc
gtattgccgatctccaccacaattgttttctctagcacgacaccagggttatttgtttca
tttacgagtggcgtggcatctatcataaggctgctgatgatctcctgcattatcttcatc
actttcgagttcatcaatatagcatttgacgcacatatgtccattggttgtttgcataag
ggcaaactaatttcgaatctatcgtccacccccatgggaactctgttaagcggactttct
tcggataagccgtttaccaagttgactgcttaccaagagttagcatatagagcaacatcg
ctagatccatcattgcgagcaccaatatatagttccaaattcagaaacaataatggtaac
acgtggtcgttgattcttaaggaatgcctgaaggtcatccaggaaaataacgagacagta
atgctgtacctaagatccatacaggatcttagcgactccacaagcgctatgcatcacaaa
aaagtggacaacctagattatatgtatgagaatgggaagttgactagtgccaacgaaagg
ctttttggtaaccgaccttcaatgatggctccattgagaaatagtgatccgttgaatgaa
tcaccaaataagttaagagttagaacagatgacagtgtgctacttaaccgcggaaacaaa
aaaaggcccacttctacgtatttgcaaaatgacatagatgaagctagacagactttcaat
ggctctatattcacccacgagacgacattaatgactgctgtacgtcttatatgcaagaaa
ttaaagaactcgataatgtcatttgttttcccctcatacgcagaaaggcaatcttatgac
gaagataataactacaaaacattgccagataagaaacacaactccaacaggggccagatt
tcagtaattgatatatggtccatttccaagaaaagacaggctgaaaagctgattccacta
cccatatgccacgccaatagtgtggtagcactcacaggactgctgatcaaatcaagaaca
gaggacccgaagggtggcatcattgcatctgtcggtgatatccttaagactttagaaagg
tctatttgtgcgttgggtgagttcgccgattgggacccagaatccatggcgtacaacgct
gctatccaggcacaaaaaactgctcaagacagagtccaacaggacagcgaggacgaagat
ggcatgaaggacacggcggacatgataagcgttctttaccaactgtccacgagcgcgttt
atggagatagtgctcgagtacaacgtcgcattgaatgatgtctacttagatgcagatgtg
gctaaactagccaactggtttctagaagtgtacaccactggcgcacccgcagctatataa
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