Saccharomyces eubayanus: DI49_4218
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Entry
DI49_4218 CDS
T08138
Name
(RefSeq) POM152-like protein
KO
K18725
nucleoporin POM152
Organism
seub
Saccharomyces eubayanus
Pathway
seub03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DI49_4218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_4218
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
DI49_4218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_Pom152
Ig-like_POM152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
28933355
NCBI-ProteinID:
XP_018220184
LinkDB
All DBs
Position
XIII:516308..520327
Genome browser
AA seq
1339 aa
AA seq
DB search
MEHRYNVFNDTPRGDHWMGHSASESPYPSYSGRPNVNTTRRFQYNDGEPNKENPVLRSSE
FENAENTNLRDEKPRIFKRDSKDRYTSEDDRKVGFTSLPLISTDVLEISKQRTLAVVLFL
IIQCYKIYDLIILKSGLPIPGLLFKNYRFNFISKYFIVDSLFLYILPSFNIPRLTFKPWM
VYLQVLTMTALSVFISSDHEFVLISLIVTTWRKFYTKELSVTGSSINHRRIVDSSAHFKG
ALTIKILPENTAMFNPLHESFCLPMDTSLFKVNSVNIPIRINSTEEIDLIELEYRDLYTN
AVEQRSLTKKDFKVINNPKTLLKKDDSILKPHTNDFEEDSTIRYLSLTLQDIGFYQIKKI
VDSKKLNLKIYQSHLIIPHCPIASITGTGGNDRCIGDSDNVSLEIQGVPPMKLAYSKIVN
GQTFSFVDSSLQPEYFESPLQSSKPRQSFTQDELNDLQWGRNQPVNIDLDSSITQDGKYA
YMVDKLIDGLGNVMDFTSFPEDLKKHHGLSYNFNVHGIPRVALEERFDSKSPTKRSIAIV
LEESKNWGSDIPYVVSLSYADTQDKSKKEMNVTTEMLTKVFQADLPGTYNLEYIESKFCP
GVIVGKSSVLVTMPVAPNMEVKSSPILDQCVGQVGLNFELSFTGAPPYYYNTKIYKLENG
ERKLYDAKRYTSEGTRNHFSYSPSREGNYEIVFDNVSNKLFTEPIKLEPVKDYTFKTSMR
VKPSAALKLHHDLKLCLGDYSNIPVALKGQGPFALTYEIIETFSSRRKTFQIEDIKTNEY
VIKTPDFTTGGDYILSLVSIKDSSGCLVGLSQPDARIKVRRDIPSATFNFFESIKESRIK
HGSVTEIPLKLSGEGPFTVKIRHMDYDGNALEEFENKFQNSYKPALKVTKEGLYQLVDIR
DSSCQGKITNENSTFKVSFLEKPSFAIQDNHRITRLTNNLFAKEEVCQGMEGTVDLALYG
SPPFILEYDLMAPNGHIFTKKIQVTTKYASLKLPNQVPGEYITTIKAIYDGNYGETDRHF
EEYLPELVIKQTVHPIPDVTFADGGKTLRACAANLDQISFSEPINLKFLQGESPFSITFS
VYHESTSRTDQYTIGEIDSENFLFEKLYEGMKLGNHAISIDSVVDANGCINNVITGSSNQ
IFVSITDAPKIHLLDPSNEYCVGDYVAYQLNGVAPFMVKYDFNGVPLKSKERSSQFIRLA
SEPGVISINSLQDSSSQCIVDFTNPGLKSEFNDLSLTIHPIPSVTVSQGNYITEDIREGD
QAEVIFSLEGTPPFCLTYVRTEETDGKHGKKRSQVVETHKVTDIYSNEYKVVTSLQGTYE
AIEITDAYCFAKNDLFFNN
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggaacacaggtataacgtgtttaatgacactccgcgaggggaccattggatgggccat
tctgcgtcagaatcaccatatccatcatatagtggccgtcccaatgttaacacaacacga
cgttttcaatataatgacggtgaacctaacaaagaaaatccagttttacgttcaagcgaa
tttgaaaatgcagaaaataccaatttgagggatgaaaaacctaggatattcaagcgtgac
agcaaagaccgctacaccagtgaagatgacagaaaggtcggttttacttcattgcccctg
atatccaccgacgttttagagatttccaaacaaaggactcttgcagtggtgttgttttta
ataattcaatgctacaaaatatatgatttgataatattaaaatctggcttaccaatacct
ggtttattgttcaagaactatcgatttaatttcatatccaaatacttcattgtggattcc
ttatttttgtatattttaccatcctttaatattcctagactgacttttaagccatggatg
gtgtatctccaggtcttaacgatgacagcattgagtgtttttatatcaagtgatcatgaa
tttgttcttatttcattgattgtgacaacctggagaaaattctatacaaaggaattgagc
gtaacaggctcatccatcaatcatcgtcgtattgttgactcttccgcccattttaagggt
gctctgacaattaagatcctgcccgaaaataccgctatgttcaaccctttacatgaatca
ttttgtttgccaatggataccagtcttttcaaagttaactccgttaacattcctataaga
ataaactcaactgaagaaatagatctcattgaattagaatacagagatctttatacaaat
gcagtagaacagcgttccttaaccaagaaagacttcaaagtcatcaataaccccaagacc
cttctgaagaaagatgattcgatcttaaaacctcatacaaacgattttgaggaggatagc
actattcgttatttgagtttaacgcttcaggatattggattttatcaaattaaaaaaatt
gttgattctaaaaagctaaatttaaagatttaccaatcacacctaattattccacactgt
ccaattgcttcaattacgggaacggggggcaatgatagatgtataggtgactcggataat
gtttcccttgagattcaaggtgtgcctcctatgaagctggcatactctaagatcgttaac
ggtcaaactttttcctttgtagactctagtttacaaccagaatacttcgaatcaccctta
caatcaagtaaaccgagacaaagtttcacccaagatgaattaaatgatttgcaatggggt
agaaatcaacctgttaatattgatttagactcctcaattacacaagacggtaaatacgca
tatatggttgataaactgattgatggtttaggaaatgtgatggacttcacaagttttcca
gaagatctgaagaaacatcatggtttatcctataattttaatgttcatggaattccacgt
gtggcgctagaagaaagatttgattctaagtcacccacaaaaagatcgattgccatagta
ttggaagaaagcaaaaactggggttcagacattccatatgttgttagcttatcatatgca
gacacacaagacaaatcgaaaaaggaaatgaatgtcaccacggaaatgttgactaaagtg
tttcaggccgatcttccaggtacttacaatttagaatatattgaatccaagttttgtcct
ggtgtaatcgttggaaaatcaagtgttctggtgacaatgccagtcgcaccaaatatggag
gttaaatcatcaccaattttggaccaatgtgtaggacaggtaggtttaaattttgagttg
tcatttaccggtgctccaccctactattataatactaaaatttataagcttgaaaacggc
gaaagaaaactatatgatgcaaaaagatatacttctgaaggcaccagaaatcacttcagt
tacagtccatccagagaaggtaactatgaaatcgtatttgacaacgtttctaataaacta
tttacagaacctatcaaattggagcctgttaaagattatactttcaaaacttcaatgaga
gtgaaaccaagcgcagcattaaaattacatcatgacttaaagctttgcttaggcgattat
agcaacattcctgtggcactaaaaggccaaggtcctttcgcattgacatatgaaattata
gaaacgttttcaagtagaagaaaaacttttcaaattgaagatattaaaactaatgaatat
gtcattaaaactcctgacttcactaccggtggtgactatattttatctttggtttctatc
aaggattcttctggttgtttagtaggcctcagccaaccagatgccagaataaaagtaaga
agagatattccatcggcaacgtttaatttcttcgagtctattaaggaatccagaatcaag
cacggctctgtgaccgaaatacccctcaaattaagtggagaaggaccatttactgttaaa
attagacacatggattacgatggaaacgctctggaagagtttgaaaataaattccaaaac
agttacaaaccggccttgaaagtgactaaagaagggctgtaccagttagttgatattcgt
gactcaagttgtcaaggtaaaataactaacgagaatagcacgtttaaagtatctttctta
gagaaaccaagtttcgctatccaagataaccatcgtattactagattgacaaataattta
ttcgctaaagaagaagtatgtcaaggaatggaaggcactgttgatttggcgttatatggc
tcgcccccattcatattggaatacgatttgatggctcctaatggtcacattttcacaaaa
aaaattcaagtaactaccaaatatgcttctttaaaactacctaatcaagttcctggagaa
tatataaccactattaaggccatttacgatggcaactatggcgaaactgataggcatttt
gaagagtacctaccagaacttgtaattaagcagacagtacatcctattcctgatgttact
tttgctgatgggggtaaaaccttacgcgcgtgtgctgccaacttagaccagatctcattt
tcagaaccaattaatttgaaatttttgcaaggtgaaagtccattttcaattacatttagc
gtttatcacgagagtacaagtagaacagatcaatataccatcggagaaattgactcggaa
aactttttgttcgaaaagctatacgaaggcatgaaattaggtaaccatgcaataagtatt
gactctgtcgttgatgcaaatggatgcataaacaatgttataactggatcaagtaaccaa
attttcgtttccattactgatgcgccaaagatccacttattagatccttccaacgaatat
tgtgtgggtgactatgtggcatatcaattaaatggtgtagctccatttatggtaaaatat
gacttcaatggcgttcctttgaaatctaaggagcgcagctcccaatttattagattggcg
tctgagccaggtgtcatatccatcaattcattacaagattcatcatcacaatgcatagtc
gattttacgaaccctggtctgaaaagtgaatttaatgatttatcattaactatacaccca
attccttcagtcactgtatctcaagggaattacattactgaggacattcgagaaggtgac
caggctgaagtgatattttcacttgaaggtacaccaccattctgcttaacttatgtaagg
acagaagaaacagatggtaaacatggcaagaaaagatcccaggttgttgaaacgcacaag
gtcactgatatatattctaatgaatacaaggtagtcacaagcttgcaaggtacctacgaa
gcgattgaaattacagatgcttattgctttgccaaaaatgatctcttcttcaataactga
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integrated database retrieval system