KEGG   Saccharomyces eubayanus: DI49_4375
Entry
DI49_4375         CDS       T08138                                 
Name
(RefSeq) HSH155-like protein
  KO
K12828  splicing factor 3B subunit 1
Organism
seub  Saccharomyces eubayanus
Pathway
seub03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DI49_4375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:seub03041]
    DI49_4375
   03036 Chromosome and associated proteins [BR:seub03036]
    DI49_4375
Spliceosome [BR:seub03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    DI49_4375
 Complex B
    DI49_4375
 Complex C
   U2 SnRNP specific factors
    DI49_4375
Chromosome and associated proteins [BR:seub03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    DI49_4375
SSDB
Motif
Pfam: PPP2R1A-like_HEAT HEAT_EZ TOR1L1_N XMAP215_CLASP_TOG GNC1_N Htt_N-HEAT_1 Adaptin_N Vac14_Fab1_bd UTP20 RRP12_HEAT
Other DBs
NCBI-GeneID: 28933512
NCBI-ProteinID: XP_018220335
LinkDB
Position
XIII:836794..839709
AA seq 971 aa
MSHPVQFVKASNTDGSHRLGGQYSIPQDLRENLQEEATRTSEKEKDVLQEKMETKTVHNR
EDEYHRKRFDLRLGPGPDTKEITSKEDTQNAVVPRKRKSRWDVKGYEPPEESQKTFSENS
DNVLVDIEGVKDLMFFKPSDHKYFAEIVSKKPIDELSKDEKKERSFLMLLLKIKNGNTAS
RRTSMRLLTEKAVTFGPQIIFDRLLPILLDRSLEDQERHLMIKAIDRVLYKLGDLTRPYA
HKILVVTAPLLIDEDPIVRSTGQEIITNLSMVTGLTTMLTVIRPDIENEDEYIRNTAARA
MAVVAKALGVNQLLPFINAACHSRKSWRARHTGIKIVQQIGLILGIGVLNHLAGLISCIK
DGLVDDHVPVRIVTANTLSTLAENAYPYGIEAFNIALEPLWKGIRSHRGKVLSSFLKAVG
SMIPLMDPEYAGYYTTEAMRIIKREFDTPDDDMKKTILLVLQKCSRVESITSNFLREEIA
PEFFQKFWIRRVALDKPLNKVVTYTTVVLAEKLGCSYAIDKLLKPLRDEAEPFRTMGVHA
VTKIVNLLGTADLDERLETRLIDALLIAFQEQTNNDSTIFKGFGAVTLSLDIRMKPFLAP
IISTILNHLKHKTPLIRQHAADLCAILIPVIKNCHEFEMLNKLNIILYESLGEVYPEVLG
SIINAMRCISSVMVIDNLQPPVNQILPTLTPILRNKHRKVEVNTIKFVGLIAKLAPTHAP
PKEWMRICFELLELLKSTNKEIRRSANATFGFIAEAIGPQDVLVALLNNLKVQERQLRVC
TAVAIGIVAEVCGPYNVLPVIMNEYTTPETNVQNGVLKAMSFMFEYIGDMSKDYIYFITP
LLEDALTDRDLVHRQTASNVVSHLALNCAGTGHEDAFIHLLNILIPNIFETSPHAILRIL
EGLEALSQAVGPGMFMNYIWAGLFHPAKTVRKPFWRVYNNLYVMYQDSMVPFYPVTRDNN
EQYVEELDLIL
NT seq 2916 nt   +upstreamnt  +downstreamnt
atgagtcatcctgtgcagtttgttaaggctagtaatactgatggtagccaccggttgggt
ggtcaatattccattcctcaagatttgagagaaaacctccaggaagaagccacacgtact
agtgaaaaggagaaggatgtgttacaagaaaagatggaaaccaagacagtgcacaataga
gaggatgagtaccacagaaaaagattcgatttgaggcttggacctggtccagacacaaaa
gaaattacctccaaggaagatactcaaaacgctgtggttccaaggaaaagaaaatctcga
tgggatgtaaaaggttacgaaccacctgaagaatctcagaaaacatttagcgaaaattcc
gacaacgtcttagttgatatagaaggagttaaagatttaatgtttttcaagccttctgac
cataaatattttgctgaaattgtatccaaaaaacctatagacgaattgagcaaggacgag
aagaaagaaagatcattcttgatgctacttctgaaaattaagaatggtaacacggcaagc
agaaggacctcaatgagacttttaactgaaaaagcagttacgtttggtccacaaataata
tttgatcgactattgcccatattactggacaggtccttggaagatcaagaaagacatcta
atgatcaaggccatagatcgtgttctttacaaactgggtgacctaacaaggccttatgcg
cataaaatattagtagtgacggccccattgctgattgacgaagatccaatagttcgttcc
actggtcaagaaatcattaccaatttgtccatggttactggcttaacaaccatgctcacg
gtgataagacctgatatcgagaatgaagatgaatatattagaaatacagctgctagggca
atggctgtagtggcaaaagccctcggtgttaatcaattgcttcccttcattaacgcagca
tgccattcgcggaaatcgtggagagcaaggcatacaggtataaaaattgttcaacaaata
ggtttaatcttgggaataggtgtactaaaccaccttgctggtcttataagttgtatcaag
gacggcttagtagacgaccatgttccagtacgaatcgttacagcgaatactttatctacg
ctggccgaaaacgcatatccgtacggtattgaggcgttcaacattgcgctggagccactg
tggaagggtataagaagtcatcgtggtaaagtcttatcttcctttttaaaagccgttggc
tctatgattccattaatggatccagagtatgctggctattatactacagaagcaatgagg
ataattaaacgcgagttcgacacacctgatgacgacatgaaaaaaactatccttttagtg
ttacaaaaatgtagtcgagttgaatctataacgtcaaactttttacgggaggaaattgca
ccagaatttttccaaaaattttggatcagacgtgtggccctagacaagccattaaacaaa
gtcgttacatacacgacagtagtgttagcagaaaagctaggctgctcgtatgccattgat
aaattattaaaaccattgagggatgaagctgaaccattcagaacaatgggagttcatgcg
gttacaaagatagtgaatttattggggacagcagatttagatgaaaggttagaaacgcga
cttattgatgcactcttgatagcatttcaggagcagacgaataacgactctacaattttc
aaagggtttggggcagttactttatcgcttgacattcgtatgaaaccttttctggcacct
attataagcacaattttgaaccacttaaagcacaaaactcctttgatccgtcagcatgca
gctgatctgtgtgcgatattgataccggtcatcaaaaactgtcacgaatttgaaatgttg
aataaattgaatataatactgtatgaatctttaggcgaagtatacccagaagttctaggt
tcaatcatcaacgcaatgcgctgtatttcgagtgttatggttatagataatctacaacct
ccagttaaccagattttacctactttaaccccaatcttgagaaataagcacagaaaagtt
gaggtaaacactatcaaattcgtcggacttattgccaagttagcaccaacccatgctcct
cccaaagaatggatgagaatatgttttgagctattagaactattaaaaagtacaaacaag
gaaataagaagatcagcaaatgcaacatttggctttattgcagaggccatcggaccacaa
gatgttcttgtagctttattaaacaatttgaaagttcaagaacgtcaattacgtgtatgt
acagctgttgccattggtattgtagctgaagtatgtggtccctataatgttttgccggta
attatgaatgaatacacaacgccagagacgaatgttcaaaatggtgtccttaaagctatg
tcgtttatgttcgaatatattggtgacatgtccaaggattacatatacttcattacgccg
ttgttggaagacgcgctcactgatagagatttagtccaccgtcagacagcctcgaatgtc
gtaagtcatttggctctgaactgtgcaggtactggacacgaggatgcctttattcaccta
ctaaatattctaatccccaatatttttgagacttcaccgcatgctattttgcgtatttta
gaggggttggaagcattgagtcaagcggttggtcctggtatgttcatgaactacatatgg
gcggggttatttcatccagcaaagaccgtaaggaagccattctggagagtatacaataac
ttatatgtaatgtatcaggactccatggtacctttttatcctgttacgcgggacaacaat
gaacagtatgtagaagagctagacttaattttataa

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