KEGG   Saccharomyces eubayanus: DI49_4433
Entry
DI49_4433         CDS       T08138                                 
Name
(RefSeq) PFS2-like protein
  KO
K15542  polyadenylation factor subunit 2
Organism
seub  Saccharomyces eubayanus
Pathway
seub03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    DI49_4433
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:seub03019]
    DI49_4433
Messenger RNA biogenesis [BR:seub03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     DI49_4433
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_RFWD3 PEP5_VPS11_N Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_WDR41 eIF2A Beta-prop_Vps41 Beta-prop_DCAF4 NBCH_WD40 WD_LRWD1 Tricorn_2nd Beta-prop_SPT8 Beta-prop_NWD2_C VPS11_N Beta-prop_HPS5 VPS8_N
Other DBs
NCBI-GeneID: 28933570
NCBI-ProteinID: XP_018219582
LinkDB
Position
XIV:<36157..>37566
AA seq 469 aa
MDGYNQNQNQNQNQSQSQQPHQPPLKKYMTQRRSVDVSSPYINLYYNRRHGLANPVVEPE
TSYTIDIMPPNAYRVRDRVINLPSKFTHLSSNKVKHVIPAIQWTPEGRRLVVATYSGEFS
LWNASSFTFETLMQAHDSAVTTMKYSHDGDWMISGDADGMIKIWQPNFSMVKEIDAAHTE
SIRDMAFSSNDSKFVTCSDDNILKIWNFSNGKQERVLSGHHWDVKSCDWHPEMGLIASAS
KDNLVKLWDPRSGNCISSILKFKHTVLKTRFQPTKGNLLMAISKDKSCRVFDIRYSMKEL
MCVRDETDYMTLEWHPINESMFTLACYDGSLKHFDLLQNLNEPILTIPYAHDKCITSLSY
NPVGHIFATAAKDRTIRFWTRARPTDPNAYDDPTYNNKKINGWFFGINNDINAVREKSEF
GAAPPPPATLEAHALPNTHGFITSKTPRQEIPGIDSSKTKGSTLPGLSI
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggacggttacaatcagaatcagaaccaaaaccaaaatcaaagtcaaagccagcaacca
catcagccgcctctgaaaaagtatatgacgcagaggcggtcagtagatgtaagttcaccc
tatatcaacctatattacaacagacgacatgggctagcgaacccagtggtggagccagaa
acttcatacacgatagatataatgcctcccaacgcctacagggttcgagatcgagtaatc
aatcttcccagcaagtttacccatttaagctctaataaagtaaagcatgtcataccggcc
atccagtggacccctgaaggtagaagactcgtagtggcaacgtatagtggggaattctct
ttatggaacgcatcatcttttacatttgaaactcttatgcaagcgcatgattcagctgta
accacgatgaagtattcacatgatggtgattggatgattagtggtgacgccgatgggatg
atcaagatatggcaaccgaacttcagtatggtaaaagagattgacgcagcacacacagaa
agcatcagagatatggcattcagtagcaatgattcgaaattcgttacttgttcagatgac
aatattttgaagatttggaacttcagtaacggtaaacaagagagagtactatcagggcac
cattgggacgtaaaaagttgtgattggcatcccgagatggggttgattgcctcggcatct
aaggataatttggttaaactatgggacccccgttcaggaaattgtatttcgtcaattcta
aaattcaaacacactgttttaaagacgagatttcaacctaccaaggggaatttattaatg
gcaatttcaaaggataaatcttgtcgtgtatttgatatcagatatagcatgaaggaactg
atgtgtgtaagagatgaaactgactatatgacattagaatggcatccaataaatgagtct
atgttcactttggcatgctatgatggatcgctaaagcattttgatcttttgcaaaattta
aacgagcctattttgactataccgtatgctcatgataagtgcatcacttcgttatcatat
aatccggtgggccatatatttgctactgcagcaaaggacagaactataagattttggaca
agggcaagaccaaccgatcccaacgcttacgatgacccgacgtacaacaacaagaagata
aatggttggtttttcggtatcaacaatgatataaacgctgtgagagagaagagtgaattt
ggtgctgcgccacctccacctgctacacttgaagcacatgcgctaccaaatacgcatggt
ttcattacttcaaagacacctcgccaagaaattcccggtatcgattcatcaaagaccaaa
ggttctactttacctggtctaagcatataa

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