KEGG   Saccharomyces eubayanus: DI49_4457
Entry
DI49_4457         CDS       T08138                                 
Name
(RefSeq) RFC3-like protein
  KO
K10756  replication factor C subunit 3/5
Organism
seub  Saccharomyces eubayanus
Pathway
seub03030  DNA replication
seub03410  Base excision repair
seub03420  Nucleotide excision repair
seub03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DI49_4457
   03410 Base excision repair
    DI49_4457
   03420 Nucleotide excision repair
    DI49_4457
   03430 Mismatch repair
    DI49_4457
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:seub03032]
    DI49_4457
   03036 Chromosome and associated proteins [BR:seub03036]
    DI49_4457
   03400 DNA repair and recombination proteins [BR:seub03400]
    DI49_4457
DNA replication proteins [BR:seub03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    DI49_4457
  DNA Replication Termination Factors
   ELG1-RFC complex
    DI49_4457
Chromosome and associated proteins [BR:seub03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    DI49_4457
DNA repair and recombination proteins [BR:seub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     DI49_4457
  Check point factors
   HRAD17(Rad24)-RFC complex
    DI49_4457
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 Rad17 AAA_assoc_2 AAA_14 RuvB_N AAA_22 AAA_16 AAA_5 AAA_11 ResIII DUF815 RCF1-5-like_lid AAA_24 AAA_7 AAA_30 DEAD Viral_helicase1 bpMoxR AAA_19 AAA_28 AAA_3 AAA_18 AAA_25 nSTAND3 Mg_chelatase RNA_helicase ATPase_2 TIP49 SLFN-g3_helicase Phage_tail_terminator_6 IstB_IS21
Other DBs
NCBI-GeneID: 28933594
NCBI-ProteinID: XP_018219606
LinkDB
Position
XIV:81856..82920
AA seq 354 aa
MQGRDTPTRRIQGRMSINTGKKSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKL
PHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQI
FSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRF
QPLPQEAIERRIANVLVYEKLKLSPDAEKALIELSNGDMRRVLNVLQSCKATLDNPDSEE
ISDDVIYECCGAPRPADLKIVLKSMLEDDWGTAHYTLNKIRSAKGLALIDLIEGIVKILE
EYDLQSEETRVQLLTRLADIEYSISKGGNDQIQGSAVIGAVKTSFEHEAAEAKV
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgcaaggaagggataccccaacaagacggattcagggaaggatgtcaataaatacgggc
aagaagagcaaagagaaccttccatgggtcgagaaatacagacctgaaacgctggacgaa
gtttatggacagaacgaggtgatcaccacggttcgtaaatttgtagacgagggcaagttg
ccgcaccttttgttctacgggcctccaggaaccggtaagacctctacaatcgttgctctg
gcgcgtgagatatacggaaagaactactctaacatggttctggagctaaatgcatctgac
gatagaggcattgacgtggtgaggaaccagatcaaagacttcgcctccacaagacagatc
ttctctaagggattcaagttgatcatactagatgaggcagacgccatgacgaatgccgcg
cagaacgcattgagaagagtcatcgaacggtacaccaagaacacacggttttgcgttttg
gccaattacgcacacaagcttactcctgcgttgctgagtaggtgcacgcggttcaggttc
caacctttgccccaggaggccattgaacgccggatagccaacgtgttggtgtacgagaag
ctgaaactatcgccggacgcggaaaaagctctgatagagctttccaacggtgacatgaga
cgtgtgttgaacgtcctgcaatcgtgcaaggccactctagacaaccctgacagcgaagag
atcagcgacgatgtcatctacgaatgctgcggggctccaaggccggccgaccttaagatc
gtgctaaaatcgatgctggaggatgactggggcaccgcgcactacacactgaacaagata
cgtagcgccaaaggcctggcgttgatcgacctgatcgagggcatcgtaaagatactagag
gagtacgacctgcaaagcgaggagacaagagtgcagttgctaaccaggctcgccgacatc
gaatactccatatccaaggggggcaacgaccagatccagggcagcgccgtcatcggcgcc
gttaaaaccagcttcgagcacgaagctgccgaggctaaagtataa

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