Saccharomyces eubayanus: DI49_4514
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Entry
DI49_4514 CDS
T08138
Name
(RefSeq) CSL4-like protein
KO
K07573
exosome complex component CSL4
Organism
seub
Saccharomyces eubayanus
Pathway
seub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DI49_4514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_4514
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
DI49_4514
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
DI49_4514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
CSL4_N
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
28933651
NCBI-ProteinID:
XP_018219660
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All DBs
Position
XIV:207516..208496
Genome browser
AA seq
326 aa
AA seq
DB search
MSICLALIATPFGIKYSITFVAQTGLINSYPVMTSDFQFPKIAYPGKLICPQYSTENKDG
EDVIFNYVCGPGTKLLQYEHNGTMLEAITATLIGTVKREEVKNTDEEEEEKLEVADQSTE
EEKSVDASSSEVVKRVVKFIRVSVLPGADDDGRTSKDANNDFANNLPKEGDIVLTRVTRL
SLQRANVEILAVEDKPSPIDSGVGSNGMGIIAAGGGSGAATFSVSQASSDLGETFRGIIR
SQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGL
MYATDWQMMTSPATGVTEKRKCAKPF
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatgtctagcgttaattgccacacctttcggtattaagtactctattactttc
gtagcacagacaggcctaatcaattcatatcctgtaatgacatctgattttcaatttccc
aagatagcttatccaggtaaactaatatgtccacaatacagtacagagaataaagatggt
gaagatgtaatttttaactatgtttgcggtccagggacaaaactgcttcagtatgaacac
aacgggacaatgttagaggctatcactgccaccttaattggtacagtgaaacgcgaggaa
gtgaagaatactgacgaagaagaagaagaaaaacttgaggtcgctgaccaatctacagag
gaggaaaaatcagtggatgcgtcttccagtgaagtggtgaagagggttgtaaaatttatc
cgagtttcagttttgccgggggcagatgatgatggcagaactagcaaagatgctaataac
gattttgccaataatctaccgaaggaaggtgatattgtgttgaccagagtgacaagactc
tcattacaaagagccaatgtcgaaattttggctgtggaagataaaccctctccaattgat
agtggagttggtagtaatgggatgggaataattgccgctggtggcggttccggagcggcc
acgttctctgtatcgcaagcatcatctgatctaggtgagacatttagaggcataatcagg
tcgcaagacgtgaggtccactgacagagatcgtgtgaaggtgatagaatgcttcaagcca
ggtgatattgtaagagcgcaagttttgtcgctaggtgatggtactaactattatttaact
accgcgagaaatgatctgggtgtagtgtttgccagagccgctaatggtgctggtggattg
atgtatgccacagactggcaaatgatgacctcaccagccacgggggtgacagagaaacgt
aaatgcgccaaacctttttga
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