Saccharomyces eubayanus: DI49_4595
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Entry
DI49_4595 CDS
T08138
Name
(RefSeq) THO2-like protein
KO
K12879
THO complex subunit 2
Organism
seub
Saccharomyces eubayanus
Pathway
seub03013
Nucleocytoplasmic transport
seub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DI49_4595
09122 Translation
03013 Nucleocytoplasmic transport
DI49_4595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_4595
03041 Spliceosome [BR:
seub03041
]
DI49_4595
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
DI49_4595
Spliceosome [BR:
seub03041
]
Complex C
Other components
EJC/TREX
DI49_4595
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
DI49_4595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
Motif
Other DBs
NCBI-GeneID:
28933732
NCBI-ProteinID:
XP_018219741
LinkDB
All DBs
Position
XIV:complement(354112..358926)
Genome browser
AA seq
1604 aa
AA seq
DB search
MTTQTLLSRLDALSRQVISPGLLNQATILTEETITNWSERSKALCSDFIALESNDEKEHW
LKILFIELFDFINQGDEGSPLRLSDIALFIEELVNGDRKGSQASLVGKMLIAVSSSVPNI
KDTNTISLCKLIPSLHEELFKFSWISSKLLNKEQTTLLRHLLKKSKYEVKKYNLLVENSV
GYAQLVALLLLAYYDPDNSLKVHAYLEEMYHIMGKYSLDSIRSLDVILNVSCQFITEEYQ
FFIEFLQKSDFWPSNHVADNSNYSTLNVGGNMIAANIISFNLSQYKEQVDKENHQKYMDM
CCILINTGFINFYSIWDNVKPDMESLQKYTEDLETELEAESTKGIENPLAMAAALSTEDE
NNEDTALVKDDDKDKDKASETSNEADLKDKQKNDTLSFGKINLLERLLIHGCITPVVHIL
KEHPKILYVNESISKYFGRIFEYLLDPLYTSKTSRDESNNMASALMVTRIDNGILAHKPR
LIHKYKTHDPFESFELNTKYVFYYSEWNSALVPFASIDDLFEKSHTFLSIIGPYLANTPT
LLSKISRIGVADIQKNQGTEFLQSTVDKWVDFVRKFIFPAIPLLQDNPIATSEVYELMKL
FPFDKRCFIYNEMMTKLSQDNLPIKVSFNKTEREAKSILKALSIDTIAKESRRFAKLIST
NPLASLVPAVKQIENYDKVSELVVYTTKYFNEFAYDVLQYVLLLRLTYSRPAVQFDGVNQ
AMWVQRLSIFIAGLAKNCPNMDISNIITYILKTLHNGNIIAVSILKELIITVGGIRDLNE
VNVKQLLMLNSGKPLKQYARHLIYDFRDDNSDIASKLTSFFTDQNAISEIILLLYSLNLK
ANTQDSHYKILSTRCDEMNTLLWSFIELIKHCLKAEAFEENVLPFVELTNRFHLSTPWVF
HIWRDYLDNQINENENFSIEQLVEGAEFDDVDLTKISKDLFTTFWRLSLYDIHFDKSLYD
ERKNTLSGKNTDQMSNRKKHSVQNQIKDVLVTGISHQRAYKKTAELVSEKSNIWNKDCED
NQIKVFIQNCVVPRVLFSPSDALFSSYFIFMAFNAENLMSILNTFISSNILKTLLFCCTS
SEAGNLGLFFTDVLKKLEEMRINGDLDEQASRKLYEWHSIITEQIIDLLSEKNYMSIRNG
IEFMKHVTSVFPILKTHIQLVYTTLEENLVNEEREDIKLPSSALIGHLKARLKKALELDE
FCSLTEEEAAQKKIYEAELEEIKCYETAYQNEQKQLALRKQLELNKSQRLQNDSSKSATN
NSTELGINDKWSYSHNEPAIPTKPSSSQWSYSKVTRHLDDINHYLATNHLQKAISLVEND
SETWNLKKLSKQNMPIFDFRNLTLEIFERYFRSLIQNPQNPDFAEKIEALKRHIKNISRE
PYTGVANSRSETFGPEYTKRSSRYGGSTGAKDTYNNANYKTSSSDRSGLKNSKPSTSYPH
KRSELPTRPSKGKVYNDRSRPARQAGPDRGESFDQQRDTRPREDYKKTNSQRPQLRFPEK
PSQGSNDNNKNTSYQQTPSYKREMPSENDEKPNKRFKKDDGNRSKFQRQDYRSTRDSGSN
FSANNSSSNRRPNETQRYNTNRKSNTQALPQGPKGGNNVSRYQR
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atgacaacacagacgcttctttcaagactggatgctctttcccggcaggtcatatctcca
ggtttactgaaccaggcaactattctaacggaggaaacaataacgaactggtctgaacga
tcaaaagctctatgttcggactttattgcgctggaatcgaatgacgaaaaggaacattgg
ctgaagattttatttatcgaattgtttgatttcataaatcaaggcgatgaaggttcccct
ctcaggctctccgatattgcactgtttatagaagagttggtgaacggtgacagaaaaggg
tcgcaggcttccctagtgggcaaaatgctcattgctgtttcgagttccgtgcccaatata
aaggacacgaacaccatatcattgtgtaagctgataccgtccctacatgaagagctgttt
aaatttagttggatatcctcgaagttattaaataaggaacaaactactttactgagacat
ttgttgaaaaaatcaaaatatgaagtaaaaaaatataaccttttggtggaaaattcagta
ggttacgctcaattggtagctttattgttattggcgtattacgatccagacaattctctt
aaagttcatgcatatttggaagagatgtatcatattatggggaaatattctttagattcc
attcgttctttagatgtcatcctaaacgtttcctgtcagtttattactgaagagtaccaa
ttttttatcgagtttttgcagaaatcggatttttggccctctaaccatgtggccgataat
tcgaattactctaccttaaatgtaggtggtaacatgattgcggctaacattatctcattc
aatttatcccaatataaggaacaggttgataaggaaaatcaccagaagtatatggacatg
tgttgcattttaataaacacagggtttatcaatttctattccatttgggataacgtaaag
cctgatatggaatctctacaaaagtatacggaggatttagaaaccgaattagaagcagaa
tccactaaaggcatagaaaaccctttggctatggcagcagctttatcgactgaagatgag
aataatgaggatactgcgcttgtgaaggatgacgataaggacaaggacaaagcctcagaa
acaagtaacgaagcagacttgaaagacaagcagaaaaacgatactttatcatttggtaaa
ataaatttattagagcgtttattaattcatggttgtattactcctgttgtccacatacta
aaggaacatccaaaaatactatatgttaatgaatccatatcaaaatattttggcagaata
tttgaatatcttttagatcctttatacacgtcaaagacatctcgcgatgagtcaaacaac
atggcgtctgctttaatggtaactcggatagataatggcatcctagctcataagccaaga
ttgatccacaaatacaaaacacatgatccatttgaatcattcgaattgaatacaaagtat
gtattttactactctgaatggaatagtgcccttgtcccttttgcatccattgatgaccta
tttgaaaagtcacatacatttttgtctatcattgggccctatttagccaacacccccacg
ctattgagcaagatctcacgtattggtgtagctgatattcagaaaaatcaaggcactgag
tttttgcaaagtacagttgacaagtgggtggattttgtaagaaaattcattttccctgcc
atcccgctgttacaggataatccaatcgccacatcggaggtttatgaactgatgaagctt
tttccctttgacaagaggtgttttatttacaatgagatgatgacaaaactatctcaagat
aatttaccaataaaagtaagcttcaataaaactgaaagagaagccaagagcattttgaag
gctttgagtatagataccatagccaaggaatctagaaggtttgctaaactgatttccacg
aatccgttggcttcattggtgcctgcagttaaacagattgaaaattatgataaagtctca
gagcttgtcgtctacactacaaagtatttcaacgaatttgcatatgatgtattgcaatat
gtactgttactacgtttaacttatagcagacctgctgttcaatttgacggtgtcaatcaa
gccatgtgggtacaacgattatcaatattcattgccggtttagccaaaaattgtcctaat
atggacatctcaaacataatcacttacattttgaaaactttgcataatggaaatatcata
gccgtttccatcttaaaggagttaatcattactgtcggtggtatcagggatctaaatgaa
gtcaacgtgaagcagctgttgatgttaaattcagggaaaccattgaaacagtatgcaaga
catttgatttatgactttagagatgacaattccgatattgcatcaaaactaacctcattt
ttcaccgaccaaaacgctatctctgaaattattcttttgttatattctctgaatttaaag
gcgaatacccaggactctcactacaagatcttgtccacaagatgtgatgaaatgaacaca
ttgttatggtcgtttattgaattgatcaagcactgtttaaaagcagaagcattcgaagaa
aacgttttgccatttgtagaattgacgaatcggttccatctatcgacaccatgggtcttt
cacatttggagagactatttagataaccaaataaacgaaaacgaaaatttttctattgag
caattggttgaaggggcagagtttgatgatgtcgatttaacaaagatttcaaaagatctt
tttactactttttggagactttcgttgtatgatattcattttgataaatcattatacgat
gaacgcaagaacactctctctgggaaaaatactgaccaaatgtcaaacagaaaaaaacac
tcagtccagaatcaaattaaagatgtcttagttaccggaatatctcatcaaagagcctat
aagaaaaccgcagaactcgtgtccgaaaagtcaaatatctggaacaaagattgtgaggac
aatcaaatcaaagtcttcatacagaattgcgtggtcccaagagttttgttttctccttct
gatgcacttttctcttcatatttcattttcatggccttcaatgcagaaaatttgatgtca
attctaaacacctttatctcctccaatattctaaaaacactgctgttctgctgtactagt
tcagaagcaggtaacttgggtctcttttttactgatgttttgaaaaaactagaagaaatg
agaataaatggcgatttagacgaacaagcttctaggaagttatacgaatggcactcaatt
attacagaacaaattattgatctcttatccgaaaaaaactatatgtcaattagaaatggt
attgaattcatgaagcacgttactagtgtcttcccaatactaaaaacacatattcagttg
gtttacacaaccttagaggaaaacttggtaaatgaagaaagagaggatattaaattacca
agtagtgcattaataggtcatttgaaggcgcgcttaaagaaagctttagaattggatgaa
ttctgcagcttaactgaagaggaagcagctcaaaagaaaatctatgaagccgaattggaa
gaaattaagtgttatgagacagcttaccaaaatgaacaaaagcagttggctttgagaaag
caactagagcttaacaaatcgcaacgacttcaaaacgattcctccaaaagtgccaccaat
aatagtacggaacttggtatcaacgacaaatggagctattcgcataatgagcccgcaatt
ccaacaaagccttctagcagccaatggtcctattccaaagttacgaggcatttggatgat
ataaatcactacctggctacaaaccatttacaaaaggcaatttccttggtagaaaatgat
agtgaaacttggaatttgaaaaaattgtcgaaacaaaatatgccaatttttgatttcaga
aatttaactttagaaatatttgaaagatatttcagatctttgattcaaaaccctcagaat
ccggactttgctgaaaagattgaggcgctcaagaggcacatcaagaacatatcgcgtgag
ccatatactggcgtggccaactcccgctctgagacttttggtcccgaatataccaaaagg
tcaagtagatatggcgggagtaccggagccaaagatacatataataatgctaactataaa
acttcaagcagtgatcgttctggcttgaaaaatagcaagccaagtaccagttatccacac
aaaagatcggaattgcccaccagacctagcaaaggcaaagtttataatgacagaagcaga
ccagctagacaagctggtccggacagaggcgagagctttgatcagcaaagagatactcgt
ccacgtgaagactataagaaaactaactcgcaacgtcctcaactaaggtttccggaaaag
ccatcacaaggaagtaatgataacaacaagaacacatcctaccaacaaacgccatcctac
aagcgtgaaatgccttcagagaatgatgaaaagcccaataaaaggttcaagaaggatgat
ggtaacagaagcaaatttcagagacaagactatagaagtacaagagatagcggtagcaac
ttcagtgcaaataacagtagtagcaatcgtagacccaatgaaacccaaagatacaacaca
aacagaaagagcaatacacaggctcttcctcaaggccccaagggaggtaataatgttagt
agatatcaacgttaa
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integrated database retrieval system
