Saccharomyces eubayanus: DI49_4649
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Entry
DI49_4649 CDS
T08138
Name
(RefSeq) PMS1-like protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
seub
Saccharomyces eubayanus
Pathway
seub03430
Mismatch repair
seub03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DI49_4649
03460 Fanconi anemia pathway
DI49_4649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seub03400
]
DI49_4649
DNA repair and recombination proteins [BR:
seub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
DI49_4649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
28933786
NCBI-ProteinID:
XP_018219793
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Position
XIV:468402..471077
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AA seq
891 aa
AA seq
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MTRINQINDIDVHRITSGQVITDLTTAVKELVDNSIDANASQIEITFKDYGLESIECSDN
GDGIDPSNYEFLALKHYTSKISKFKDVAKVETLGFRGEALSSLCAIANLSVVTTNLPPRA
DRLEYNMAGHVSSKTTTSRNKGTTIQVSHLFHNLPVRQKEFARTFKRQFTKCLTVLQGYA
VINSGIKLSVWNVTSKGKKNLILSTMRNSSMKKNISSVFGANGVRGLEEVDLALDLNPFK
QGMLRKYTDDPDFLDLDYKIQVKGYISQNSFGCGRNSKDRQFVYVNKRPVEYHTFLKCCN
EVYRTFNNVQFPVIFLNLELPTNLVDVNVTPDKRVILLHNEQVVIDVFKENLINYYNGQE
LALPKRMCSQPEQQTPKRHRIEFRTHVANDENMTHKTINHSYGDTGNKYSESTLTCRDNA
LEDADPFTNTADKSKDTQLTSIMDYKHEILNGDPGSECDASVESPLALNEDNSSTPAKKS
SSASAKFDDVSSINLGEFSNPELQHLVNTTKTSNSENVIEEPVYFEIDGEKFQEKATLSQ
DNGLVFVDDGAHRQPDKCCHHERQGSADSEQDDENDSVYAQIEPVEINVRTQLRSSRSLN
SKSNRSISKDNYRSLSDGLSHRRLQDEIIEFNSSTKGLREMIKNGRMMSSIINKRRSQSH
KNLIKKERELENFEEGEKYLTLTVSKEDFKKMEIVGQFNLGFIIVTRKIGDKYDLFIVDQ
HASDEKYNFETLQTVTVFRSQKLIIPQPVDLSVIDELTVLDNLPVFEKNGFKLKIDEEEE
FGSRIKLLSLPTSKQTLFDLDDFNELIHLVKEDGGLRRDSIRCSKIRSMFAMRACRSSIM
IGKPLNRKTMSKVVHNLSGLDKPWNCPHGRPTMRHLMELRDWNSFSKDYKI
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaattaaccagataaacgacatagatgttcaccgaattacatctggacaggtt
atcaccgatttaacaacagccgtgaaagagctcgttgataatagtatagatgccaatgca
agccagattgaaattacattcaaggactatggcctcgaatctattgaatgttcagataat
ggcgatggtatagatccttcaaactatgaatttttagctttaaaacattacacttcaaaa
atttcaaaatttaaagacgttgctaaagtggagacattaggatttagaggagaagcatta
tcctccttatgcgccatagcaaacttgagcgtcgtaacaacgaacctaccaccaagggca
gacagattggaatacaatatggctggccatgtctcatcaaagacaacaacgtcaagaaac
aaggggaccacaatacaggtttcacacttatttcataacctgcctgttaggcaaaaagaa
tttgccagaactttcaaaagacagttcaccaagtgcctcaccgttttgcaaggttatgca
gttatcaattctggcatcaaactctccgtttggaatgtaacatcaaagggtaaaaaaaat
ctaatcctatcaacaatgagaaattcaagcatgaaaaaaaacatctcttctgtctttggt
gcaaatggtgtgcgaggactcgaagaggttgatttagcccttgatttaaaccctttcaag
caaggaatgcttaggaaatacactgacgatcctgatttcttagatctcgactataagata
caagttaaaggctatatatcgcaaaattcttttggatgtggaagaaattctaaagacaga
caattcgtttatgtyaacaaaaggccagtggagtaccatacctttttgaaatgttgcaat
gaagtttacagaacatttaataacgttcaatttccagttatttttttgaacttagaattg
ccgaccaacttggttgatgtgaatgtcactccagataaaagagtaatactgctacataat
gaacaagtggtcattgatgtgttcaaggaaaatctgattaattactacaatgggcaggag
ttggcccttcccaaaagaatgtgttcccaaccagaacagcaaactccgaaaagacataga
attgaattcaggacccacgttgctaatgatgaaaacatgacgcacaaaaccattaatcac
agctatggtgatactggaaacaaatatagtgagtccactcttacatgccgcgataatgca
cttgaagatgctgatcccttcacaaatactgctgataaaagcaaagatacgcaactaacc
tctataatggactacaagcatgaaattctgaacggtgaccccggttcagagtgtgacgct
tctgttgaatcaccgcttgccttgaatgaggacaactcaagtacaccggctaagaaatca
tcaagcgccagtgcgaaatttgacgatgttagtagtataaacctaggggaattttccaat
cccgagcttcaacatttggttaacacaactaaaacatctaactctgaaaacgttattgaa
gagcctgtttacttcgaaattgatggtgaaaagtttcaagaaaaagcaacgctgtcacaa
gataatggattggttttcgtggatgatggagctcaccgacagccagataaatgctgccat
catgaaagacagggtagtgctgactcggaacaagatgacgagaacgattcagtatatgca
cagattgaacctgtcgaaatcaatgttagaacgcaattgagaagctcaagatcgctcaat
tcaaaatctaatcgctcaatatccaaagataactaccggtcattaagtgatggactatca
cacagaaggctccaagacgaaataatagagtttaattcaagcacaaaaggacttagggaa
atgataaaaaacgggagaatgatgagtagcattataaataaaagaagatcacaatcacac
aaaaacttgattaaaaaggaaagagaactggagaactttgaagaaggggagaagtacttg
acactaactgtttccaaagaagacttcaagaagatggagatagtcggacagtttaatttg
ggattcattatagtaaccagaaaaataggagataagtatgacctgtttattgttgaccag
catgcaagtgatgaaaagtataattttgaaacactacaaactgtaacagttttcaggtca
caaaaacttattataccacagccagtagatttaagtgttattgatgaacttacagttcta
gacaatcttcctgtttttgagaagaatgggtttaaactgaaaattgatgaagaggaagag
tttggctcgaggataaaactattaagtttacctacgtccaaacaaacactttttgatttg
gatgacttcaatgaactaatacatttggtcaaggaagacggtggtctgagaagagacagc
atcaggtgctccaagattcgatcgatgtttgctatgcgggcatgtagaagtagcataatg
ataggtaagccactgaacaggaagacaatgtctaaagttgtccataatctcagtgggtta
gacaagccgtggaattgtccccacgggcgccctacaatgagacatttgatggagttgcgt
gattggaactcattctcgaaagactataaaatatga
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