Saccharomyces eubayanus: DI49_4746
Help
Entry
DI49_4746 CDS
T08138
Name
(RefSeq) PRP2-like protein
KO
K12814
pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 [EC:
5.6.2.6
]
Organism
seub
Saccharomyces eubayanus
Pathway
seub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DI49_4746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
seub03041
]
DI49_4746
Enzymes [BR:
seub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DI49_4746
Spliceosome [BR:
seub03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
DI49_4746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
Cas3-like_C_2
AAA_30
NB-ARC
ABC_tran
Helicase_RecD
ATPase
PhoH
Motif
Other DBs
NCBI-GeneID:
28933883
NCBI-ProteinID:
XP_018219882
LinkDB
All DBs
Position
XIV:complement(639408..642077)
Genome browser
AA seq
889 aa
AA seq
DB search
MSNSISGTGKRRVKRTYEVTRKDDGVISAESASPMSREEEEEEEEARKEDPIFLRPKKSR
YDPNKTFSSTRQGSEDHAVSKEELLESERKASNNGKQALLKSEVSAMGNLVHVTQNQAEN
ASNSDSNGGEDRSRKAEVVHKQTNAKKSENGNRQRMWEEQQLQNAMAAKNDNPDDITVEG
SDKYDYVFDTDAMIDYTNDDDDLLPEEKLQYETRLAEALETEEKRILTIQETRKLLPVYQ
YKDELLKEIEKHQVLIIMGETGSGKTTQLPQYLVDDGYTKQGEFQIAITQPRRVAATSVA
ARVADEMNVVLGKEVGYQIRFEDKTTPNKTILKYMTDGMLLREFLADSKLSKYSCIMIDE
AHERTLATDILIGLLKDILPKRPNLKLLISSATMNAKKFSEFFDDCPIFNVPGRRYPVDI
HYTLQPEANYIHAAITTIFQIHTTQALPGDILVFLTGQEEIERTKSKLEEIMFRLGSRTR
EMLITPIYANLPQEQQSKIFQPTPENCRKVVLATNIAETSLTIDGIKYVIDPGFVKENSY
VPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYSHELELMPKPEITRTNL
SNTVLLLLSLGVTDLIKFPLMDKPGIPTLRKSLENLYILGALNSKGAITNLGRMMCEFPC
EPEFAKVLHTAASHEQCQGVLEECLTIISMLHETSSLFIGQKKEAAASVTSEVESDHMLY
LEIFNQWRNSKFSRSWCQDHKIQFKTMSRIRNIRNQLFRCSEKLGLVEKNDRARVKVSNS
TVYLNGRITRCFISGFPMNVVQLGPTGYHTMGKSSGGLNVNIHPSSILFANYKEKAQRPS
KYVLYQQLTLTSKEFIRDCLVIPKEEWLAEMVPQVFKGLLGEKTNRGRE
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaactctatatcaggtactggtaagcgaagagtgaagagaacctatgaagttacc
aggaaagatgatggcgtaataagtgccgagtcagcctctccgatgagtagggaagaggaa
gaggaagaggaagaagctagaaaggaggaccctatatttttgcgaccaaaaaaatcacgt
tatgacccaaataaaactttttcctctaccagacaaggatcggaggatcatgcggtatca
aaggaagaactattagaatcagagaggaaagcttccaataatggcaagcaagctctgtta
aagagcgaggtttctgcgatggggaatctggtacatgtaacccaaaatcaagctgagaat
gcttctaattcagattcaaatgggggagaagatcgaagtcgcaaagcggaagttgtgcat
aagcaaactaacgctaaaaagagtgaaaatggaaatagacaacgaatgtgggaagaacag
cagctacaaaacgcgatggctgcaaaaaatgacaatcctgatgacatcaccgtagagggg
tctgacaagtacgactatgtattcgatacagatgcaatgattgattacaccaacgatgac
gatgatttgctgcctgaagaaaaacttcaatacgaaactcgtttagcagaagcattagag
actgaggaaaaacgtatactaactatacaagaaacaagaaaattattgcctgtataccaa
tataaagatgaactacttaaggagatcgagaaacatcaagtgttgattataatgggtgaa
actgggtcaggtaagactacgcaattgcctcaatatttagtagatgatggttacaccaaa
cagggggagttccaaattgccataacgcaacctcgtcgtgtggctgccacttctgttgca
gcgagagtggccgacgaaatgaatgttgtacttggtaaggaagtgggctaccaaattcgt
tttgaagataagactactcccaataagacaattctgaaatatatgacagacggtatgtta
ctgagggaatttcttgcagattccaagctatccaagtactcttgcattatgattgacgaa
gctcatgaacgtaccttagctacagatatcttgataggtttgctgaaagatattttaccc
aaaaggcctaacttaaaactattaatttcatcagccacaatgaatgcgaaaaagttctcg
gaattttttgatgattgtcccatctttaacgttcctgggagaagataccctgtcgatatt
cattacacattacaaccggaagcaaactacatacacgctgccataacaacaattttccaa
attcacaccacacaagctttaccaggggatatactggtgttcttaacagggcaagaagaa
atcgaaagaacaaagagtaaattagaggaaattatgtttagattaggttctcgaacaagg
gaaatgcttataacacctatctatgcaaatttacctcaagaacaacaatcgaaaattttt
caaccgactccagagaactgtaggaaagtcgtcttggcaactaatattgcagaaacatcc
ttgaccattgacggtatcaaatacgttattgatcccggatttgttaaggaaaattcatat
gtaccttctacaggtatgacacaacttttgacggtaccatgctcaagagcttcagtagat
cagcgtgccggtagagctggccgtgtggggccaggaaagtgttttagaatttttacaaaa
tggtcatattcacacgagttagaactcatgcccaagcctgagattacgagaacaaatctc
tctaacactgtattgctattattatctctgggtgttaccgatttgataaaatttccttta
atggataaaccaggtattcccacattacgaaaatccttggagaatttgtacattttaggt
gcgttgaatagtaaaggggcgattaccaacctgggcagaatgatgtgtgaattcccctgt
gaacctgagtttgcaaaagttcttcatacagctgcttcgcacgagcaatgccaaggtgtg
ttagaagagtgtttgaccataatttcgatgttacacgaaacatcgtcactatttattggt
cagaagaaggaagctgcagcaagcgtaacaagtgaagtggaaagtgaccatatgttgtat
ttagaaattttcaatcagtggagaaattccaaattttccaggagttggtgccaggatcac
aaaattcaatttaaaacgatgtcgaggataagaaacattagaaaccaactattcaggtgt
agtgagaaactggggttggtggaaaagaatgatcgggctagagtgaaggtaagtaattca
acggtttacttgaatggcaggataacgcgttgcttcataagtggattcccaatgaatgtt
gtacagttggggcccaccggataccacacgatgggtaaatcgtcaggtggactaaacgtt
aatattcatccctccagtatccttttcgctaattacaaagaaaaggcgcagagaccaagc
aaatatgtgctttatcaacaattgacgctgacatcgaaggagtttatcagagactgtctg
gttattcctaaggaggaatggttggcggagatggttccgcaagtttttaaaggcttgctt
ggggagaaaacaaatagaggaagagaatga
DBGET
integrated database retrieval system
