Saccharomyces eubayanus: DI49_4890
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Entry
DI49_4890 CDS
T08138
Name
(RefSeq) DBP5-like protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
seub
Saccharomyces eubayanus
Pathway
seub03013
Nucleocytoplasmic transport
seub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DI49_4890
03015 mRNA surveillance pathway
DI49_4890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_4890
Enzymes [BR:
seub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DI49_4890
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
DI49_4890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
28934027
NCBI-ProteinID:
XP_018219277
LinkDB
All DBs
Position
VIII:complement(<195777..>197225)
Genome browser
AA seq
482 aa
AA seq
DB search
MSDTKKDPADLLASLKIDNDKKDPSATSTKETAESKLDNTIAPVKVEEKAVPKTNEKKED
EKDSNLVSSAYEVKVKLADIQADPDSPLYSAKSFDELGLAPELLKGIYAMKFQKPSKIQE
RALPLLLHNPARNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLE
VVQEMGKFTKITSQLIVPDSFEKNKQINAQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDE
ADNMLDQQGLGDQCIRVKRFLPKDTQLVLFSATFADAVRQYAKKIVPNANTLELQTNEVN
VDAIKQLYMDCKNEADKFEVLTELYGLMTIGSSIIFVATKKTANVLYGKLKNEGHEVSIL
HGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLPTLANGQADPATY
IHRIGRTGRFGRKGVAISFVHDKNSFNILSSIQKYFGDIEMTRVPTDDWDEVEKIVKKVL
KD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatacaaagaaggacccagctgatttactagcttctttgaagattgataacgat
aaaaaggaccccagtgcaacttcaacgaaggagaccgctgaaagtaagctagacaacacc
atcgctccagtcaaggttgaggaaaaagcagttcctaaaactaacgagaaaaaggaagat
gaaaaggacagcaatttggtcagctcggcatatgaagttaaggtcaaacttgctgatatc
caagctgatcccgattcaccactctacagcgccaaatcctttgatgaattaggactagcg
ccagagttactaaagggaatatatgccatgaaatttcagaaaccatccaagattcaagaa
agagccttaccattactattacataacccagctagaaatatgattgctcaatctcagtca
ggtaccggtaagactgccgctttttctttgacaatgctgacaagagtaaacccggaagac
gcatccccacaggcaatatgtttagccccctccagagaacttgctagacaaactttagaa
gttgttcaagaaatgggtaaatttacgaaaataactagtcagttgatcgtcccggactcc
tttgagaaaaacaaacaaatcaatgctcaagtgattgttggtactccaggtacagttctt
gacctaatgcgtagaaaattgatgcaattgcaaaagatcaaaatatttgttttagatgaa
gctgataatatgttagatcaacaaggtcttggtgaccaatgcattcgtgtcaagaggttt
ttacccaaggatacccaattagttctattcagtgctactttcgctgatgcggttaggcaa
tatgcgaagaagattgttcctaatgcaaatacactagaattacaaacaaatgaagtcaac
gttgacgctattaagcaactgtacatggattgtaaaaacgaagccgataaatttgaagtt
ctgactgagctttatggtttaatgaccattggatcttctattatttttgttgctaccaag
aaaacggcaaatgtcctatatggtaaactaaaaaacgaaggccatgaagtttctatcttg
catggtgacttgcaaactcaagaaagagatagattaatagatgatttcagagagggtagg
tccaaggttttaatcactaccaatgttcttgcccgtggtattgatatccctacagtttca
atggttgtaaactatgatcttccaacacttgctaacggacaagccgatccggccacttat
attcacagaatcggtagaactggtagatttggtagaaagggtgttgccatttccttcgta
catgacaaaaactctttcaacattttatcttcaattcaaaaatactttggtgatatagaa
atgacacgtgtcccaacagatgattgggatgaagtcgaaaaaatagttaagaaagtatta
aaggactag
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