Saccharomyces eubayanus: DI49_4917
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Entry
DI49_4917 CDS
T08138
Name
(RefSeq) SKI7-like protein
KO
K12595
superkiller protein 7
Organism
seub
Saccharomyces eubayanus
Pathway
seub03015
mRNA surveillance pathway
seub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DI49_4917
09123 Folding, sorting and degradation
03018 RNA degradation
DI49_4917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_4917
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
DI49_4917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ski7_3rd
Ski7_2nd
GTP_EFTU
MMR_HSR1
DO-GTPase2
AAA_29
Motif
Other DBs
NCBI-GeneID:
28934054
NCBI-ProteinID:
XP_018219302
LinkDB
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Position
VIII:complement(244111..246336)
Genome browser
AA seq
741 aa
AA seq
DB search
MSLLEQLARKRLEKSKDPSNIAQSQSTSKSASLLERLHKNREAKSINGESRRKDLKSLLA
KDRITKNDNTSNQHTFTLSSKLSALRKPYNNLDTEAKPAPSKSTEGQSPVQRRSSDVNRD
IKDPWNVLNEINYYFSLKEHERIKQTDGFAFTEFVSNNRSKESKTFSSSLSIKKHYNELF
TVFQPSTVPKTTHDNALKNFNKPSPDDIIQSAQLNAFNEKLVNLSIESKSKADKKELIEL
QTPPIESIDVNSFIANHSLNLTCLFLGDTNSGKSTLVGHILYELHEISMASIRDLKKNVD
NFDPTTSNHFKIIVDNTKIERESGSSMFKKTIQIENSLLPSSSSLTLIDTPGDARFFNKE
TINSILTFNPDVFTLVIDCNYDSWEKLLDGPTNKIYEILRIISYLNMNSTYKKRLIILLN
KADSIGWDKQRLEMIQSELLYMLTETFQWETTQFQFIPCSGLSGSNLNSANNVVTKSKYK
SEFDSINDVPEWYEGPTFLSHLYSLMEANMNKIETTLDEPFTGIVLHNSVLPLSTENNGI
SFKIFIKSGYIQTGQTIEIHTPYGEKTYYGIITQMIKPKMTLRPDIKNRSPVGVHSDILE
IYVKIHPTDEFAKKQIHIYKSDLIISPRKANTLSPNLPNSLKLLNLRSMKLSIQTCAFSD
PIVLDSELILYHDLTYTTIKLVKIVGTNASSINPNQSLTIEVEIIAPGCALNVINSKYVT
NDVVITSTDYKTVAVGKIACQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtctttattagaacaattagcaagaaaaagactagaaaagtcgaaagacccctcaaat
atagcccaatcacaaagtacttctaaaagtgcttccttactagaaagactccataagaat
agagaagctaaaagtatcaatggtgaatccagaagaaaagacttgaagtctcttcttgca
aaagataggattacaaaaaatgataatacttcaaatcaacacactttcacattaagttca
aaactctctgctttaaggaaaccatataataatttagacacagaggcaaaaccagcacct
tctaaaagcacggaaggtcaatcccctgtccaaagaaggtcgtccgatgttaaccgcgat
attaaagatccatggaatgttctaaatgagataaattactatttttctttgaaagagcat
gagcggataaagcaaaccgatgggtttgcgttcaccgaatttgtctcaaacaataggtca
aaagaatcaaaaacattttcgtcatctttgtctatcaaaaaacactataatgagctcttt
actgttttccagccttctactgtaccgaaaacaactcatgacaatgctttgaaaaatttc
aataaaccaagtcctgacgatataatacagtctgcccaattgaacgccttcaatgaaaaa
ttagtaaatttgagtattgaatcaaaatctaaggccgataaaaaagaattaattgagcta
caaacacctccaattgaatcaattgatgtgaattcattcattgccaatcattctttgaat
ttaacttgcttatttcttggtgatacgaattcaggtaagtccactctagtgggacatatt
ctatatgaattacatgaaatttctatggcttcaataagagatttaaagaaaaacgttgat
aactttgatccaacgacatccaaccatttcaaaatcattgtagataacaccaaaatagaa
agggagagtggatcttcgatgttcaaaaagacaattcaaattgaaaattctctactacca
tcatcatcatccttgacccttatagacacccctggggatgccagatttttcaacaaggaa
accattaactcaattttgacattcaacccagatgtttttacactagttattgattgcaac
tatgattcttgggaaaaattattagatggtccaactaacaagatttatgaaattttaaga
atcatatcatacttgaacatgaattccacatacaaaaagcgattgattattcttttgaat
aaagcagattcgattggctgggacaaacaaaggttagaaatgattcaatctgaattgctg
tatatgctaacggaaacctttcaatgggaaaccacacaattccagttcattccatgctcc
ggtttgtcaggttcaaatttgaatagtgctaataacgtcgttaccaagtctaaatacaaa
tctgagtttgactctataaatgatgtacccgaatggtatgaaggaccaacatttctatct
catctgtattcattaatggaagccaatatgaataagatagaaaccactttggacgagcca
tttactggtatagtgctgcataattctgttctcccattatccacagaaaacaacggtata
tcgttcaagattttcatcaaaagtggatatattcaaactggtcaaacgattgagattcat
actccatatggagaaaaaacctattatggcatcattacacagatgattaaacctaaaatg
acgttgaggcctgatataaaaaatcgatcacccgttggtgtacactctgacattctggaa
atttatgttaaaatacaccctacggatgaatttgcgaaaaagcaaattcacatttacaaa
agcgatttaataatttctcctagaaaagcaaacactttgtcaccaaatttaccaaattct
ctgaagttattaaacctgcggtcaatgaaattgtcgatccaaacttgcgcgttcagtgac
cctatagttttagattctgaattgatcctttaccatgatttaacatacactacaatcaag
ttagtgaagattgttggaactaacgctagttcgattaacccaaaccaatcactaactatt
gaggtcgagattatcgcaccaggctgtgccttaaacgtgattaattccaaatatgttaca
aatgatgttgttataacatcgacagactataaaaccgttgcagtgggaaaaatcgcatgt
caataa
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