Saccharomyces eubayanus: DI49_5032
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Entry
DI49_5032 CDS
T08138
Name
(RefSeq) DED1-like protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
seub
Saccharomyces eubayanus
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_5032
03041 Spliceosome [BR:
seub03041
]
DI49_5032
03036 Chromosome and associated proteins [BR:
seub03036
]
DI49_5032
Enzymes [BR:
seub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DI49_5032
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
DI49_5032
mRNA cycle factors
Common to processing body (P body) and stress granule
DI49_5032
Spliceosome [BR:
seub03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
DI49_5032
Chromosome and associated proteins [BR:
seub03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
DI49_5032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
Utp25_C
Motif
Other DBs
NCBI-GeneID:
28934169
NCBI-ProteinID:
XP_018219412
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Position
VIII:481533..483392
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AA seq
619 aa
AA seq
DB search
MAELSEQVQNLSINDNNENGYVPPHLRGKPRGARNNSSNYNNSNGGGYNGGRGGSFFGGN
NRRGGGGYSSGGFFGGNNGGSGGSRGNGRSGGRWVDGKHVPAARNERTEATLFGVPEDPN
FQSSGINFDNYDDIPVDASGKDAPEPITEFTSPPLDELLLENIKLARFTKPTPVQKYSVP
IVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPEAQGSFYQRKAYPTAVIMAPT
RELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGK
ISLANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARD
FLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSATTDDGLTLIFVETKRMAD
QLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAASLLVATAVAARGLDIPNVTHVIN
YDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENANLVKGLHEILTEANQEVPPFLKDAM
MSAPGSRSNSRRGGFGRSSGNRDYRKSGGGASAGGSWGAPKSREGSFRGGSGSGSGWGSD
NKSSGWGNSGGSSNNSSWW
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggctgaactgagcgaacaagtgcaaaacttaagcatcaacgacaacaacgagaatggt
tacgttcctcctcacttaagaggcaaaccaagaggtgccagaaacaacagcagcaactac
aacaacagcaacggcggcggctacaacggtggccgtggtggcagtttcttcggtggtaac
aaccgtcgtggcggtggtggctacagcagcggcgggttcttcggtggcaacaacggaggc
agcggcggtagcagaggcaacggccgttccggtggtagatgggtcgatggcaaacacgtc
ccagccgccagaaacgaaagaaccgaggcaaccttattcggtgttcctgaggatccaaac
ttccaatcctccggtatcaacttcgataactacgatgatattccagtggacgcttccggt
aaggatgctcctgaaccaattacagaatttacctctccaccattggacgaattgttattg
gaaaatatcaagctagcccgtttcaccaagccaactccagtgcaaaaatactctgtccct
atcgttgccaacggtagagatttgatggcttgtgcgcaaactggttccggtaagaccggt
gggtttttgttccccgtcttgtccgaatctttcaagaccggtccatcccctcaaccagaa
gctcaaggctccttctaccaaagaaaggcctacccaaccgccgttatcatggccccaacc
agagaattggctacacaaattttcgacgaagccaagaaattcacctacagatcctgggtc
aaggcttgtgtcgtgtacggtggttctccaatcggtaaccaactaagagaaatcgaacgt
ggttgcgatcttttggtcgctaccccaggtcgtttgaacgatttgttggaacgtggtaag
atctctttggccaacgtcaagtacctggtcttggatgaagctgatagaatgttggatatg
ggtttcgaacctcaaatcagacatatcgtcgaagactgtgacatgacacctgttggtgaa
agacaaacccttatgttctcagccactttcccagctgatatccaacatttggcccgtgat
ttcttaagtgactacatctttttatccgtcggtagagtcggttctacttctgaaaacatt
acccaaaaggtcttgtacgttgaaaaccaagataagaaatccgccctattagatttattg
tctgccaccactgatgatggtttgactttgattttcgtggaaacaaagagaatggccgac
caattgacagatttcttgatcatgcaaaacttcagagctactgccattcacggtgaccgt
actcaatccgaaagagaacgtgccttggctgctttcagatctggtgccgccagtctattg
gttgccaccgctgttgctgctagaggtttagatattccaaacgtcacccacgttatcaac
tacgacttgccaagcgatgtcgatgattacgtccatagaattggtagaaccggtcgtgcc
ggtaacaccggtcttgccaccgccttcttcaacagcgaaaacgctaaccttgtcaaaggt
ttgcatgaaattttgactgaagctaaccaagaagttcctccatttttgaaagacgctatg
atgagtgctcctggtagcagaagcaacagtcgtagaggcggtttcggtcgcagcagtggt
aacagagattaccgtaagagtggcggcggcgctagcgctggtggctcctggggagctcca
aagagtagagagggctccttcagaggtggcagcggcagtggcagcggttggggtagcgac
aacaaatcatctggctggggtaacagcggtggttcttcaaacaactcttcttggtggtga
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