Saccharomyces eubayanus: DI49_5296
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Entry
DI49_5296 CDS
T08138
Name
(RefSeq) MEX67-like protein
KO
K14284
nuclear RNA export factor
Organism
seub
Saccharomyces eubayanus
Pathway
seub03008
Ribosome biogenesis in eukaryotes
seub03013
Nucleocytoplasmic transport
seub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DI49_5296
03015 mRNA surveillance pathway
DI49_5296
03008 Ribosome biogenesis in eukaryotes
DI49_5296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_5296
03009 Ribosome biogenesis [BR:
seub03009
]
DI49_5296
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
DI49_5296
mRNA cycle factors
Stress granule specific factors
DI49_5296
Ribosome biogenesis [BR:
seub03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
DI49_5296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
RRM_9
LRR_NXF1-5
TAP_C
LRR_9
LRR_4
DHU1_N
Motif
Other DBs
NCBI-GeneID:
28934432
NCBI-ProteinID:
XP_018218868
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Position
XVI:complement(209071..210888)
Genome browser
AA seq
605 aa
AA seq
DB search
MSGFHNVGNINMMAQQQLQQNRVKVSIRNWQNATMNDLINFISRNARVAVLDAHVDGPLV
VGFVNSKAEAESLMKWNGVRFAGSNLKFELLDGNGGSAGTSDTISFLRGVLLKRYDPQSK
LLNLGALHSDPELIQKGVFSSISTQSKMFPAMMKLASTEPSLVVESVNLADNQLKDISAI
STLAQSFPNLKNLCLANNQIFRFRSLEVWKNKFKDLRELLMTNNPITTDKLYRTEMLRLF
PKLVVLDNVIVRDEQKLHSVYSLPMKIQQFFFENDALGQSSTDFATNFLNLWDNNREQLL
NLYSPQSQFSVSVDSTIPPSTVADSDQTPSFGYYMPCSRNISKVSSEKSIQQRLSIGQES
INNIFKTLPRTKHHLQDQPNEYSMETISYPQINGFIITLHGFFEETGKPEMEANKKTGKN
NYQKNRRYNHGYNSTSNNKLFKKSFDRTWVIVPMNNSVIIASDLLTVRAYSAGAWKTASV
DVPASLPLQQPSVLPQAAIPPNASMNPNITTPPPPQPSVVPGGMNMPGVPQGPMVMAPTL
QLPPDVQSRLNPVQLELLNKLHLQTKLNAEYTFMLAEQSNWNYEVAIKGFQGSMNGIPRE
AFVQF
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggttccataatgtgggaaatatcaatatgatggcccaacagcagttgcaacaa
aacagagtaaaagtcagtataaggaactggcagaatgctacaatgaatgatttaattaat
ttcataagcaggaacgctcgagtagctgtgcttgacgcccatgtggacggaccattggtt
gtcggttttgtgaattcaaaggctgaagccgaatcgttaatgaaatggaacggtgtccgt
tttgcaggtagcaatttaaaatttgagcttttggatggcaatggaggttctgctggaact
tcagacactatttcgtttctaaggggagtattacttaagaggtatgatccccagtcgaaa
ctattaaacctgggggcattgcattctgaccctgaactaattcaaaaaggtgtcttcagt
tccatttccacccagtctaagatgtttccagcaatgatgaagctagcttctacagaaccc
agtttagtagtggagagtgtgaatcttgcggataaccaactaaaggacatttccgcaatt
tccacattggctcaatcgttcccaaatttgaagaatctttgtttggctaataaccaaatt
ttcagattcaggtcactggaagtttggaaaaacaaattcaaagatttgagagagctcctc
atgacaaataaccccatcactaccgataagttgtaccgcactgaaatgttaagactattc
cccaagttagtggtgctggacaatgttattgtaagggacgaacaaaaactgcatagtgtc
tattcgctaccaatgaaaatccaacagtttttttttgaaaatgatgcgttggggcagtcg
tccacggattttgcaaccaactttttaaacctatgggacaataacagagaacaattgtta
aatctgtactcaccacaatcccaattttctgtctccgtggactccacaattcctccatcc
acggtagcagactctgatcaaaccccgtcgtttggttattacatgccatgttcacgcaat
atctccaaagtatccagtgagaaatccatccagcaaagactatcgattggccaagagtcc
atcaacaacatattcaagacattaccaaggacgaaacaccatcttcaagaccagcccaat
gaatattccatggaaacgatcagctatcctcaaatcaacgggttcatcattactttacac
ggtttttttgaagaaactggcaagcctgaaatggaagccaacaagaaaacggggaaaaac
aactaccaaaagaatagaagatacaaccatgggtacaactccacttcgaacaataaactg
ttcaaaaaatcctttgatagaacttgggtaatcgttccgatgaacaatagcgtcataatt
gcatctgatttattaaccgtaagagcgtactccgcgggcgcttggaagaccgcatctgtt
gacgtgccagcatcattgccactgcaacaaccttcagtgctaccacaggccgccatccca
ccaaacgcaagcatgaacccaaacataacgacaccgccaccaccacaaccttcagtggtt
cccgggggaatgaacatgcccggcgtgccccaggggccaatggtcatggcacccactcta
caactgccaccggacgtccaatcgcgcttgaaccccgtacaactcgagctgctaaacaag
ttgcatctgcaaaccaagttgaacgcggagtacacgtttatgttggccgagcaaagcaac
tggaactacgaagtcgccataaaggggttccagggtagcatgaatggcatcccgagagag
gcattcgtgcaattctag
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