KEGG   Saccharomyces eubayanus: DI49_5434
Entry
DI49_5434         CDS       T08138                                 
Name
(RefSeq) RAD1-like protein
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
seub  Saccharomyces eubayanus
Pathway
seub03420  Nucleotide excision repair
seub03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DI49_5434
   03460 Fanconi anemia pathway
    DI49_5434
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:seub03032]
    DI49_5434
   03400 DNA repair and recombination proteins [BR:seub03400]
    DI49_5434
DNA replication proteins [BR:seub03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    DI49_5434
DNA repair and recombination proteins [BR:seub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     DI49_5434
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 28934570
NCBI-ProteinID: XP_018219003
LinkDB
Position
XVI:479613..482951
AA seq 1112 aa
MSQLFYQGDSDDELQEELTRQTVQASQDSRNENKDESIEADHLDEVTNEGFKLLDEGAVL
YPLIPNEPDDTETSKPNIDDIRPVDIQLTLPLSFQQKVVESSLITEDGLVIMGKGLGLLD
IVSNLLHVLATPTSINGQLKRALVLVLNAKPIDNVRIKEALEELSWFTNTETDKDSTSLE
DDDGLFERPFSVVTADSLSVEKRRKLYISGGILSITSRILIVDLLSGIVHPNRVTGMLVL
NADSLRHNSNESFILEIYRSKNTWGFIKAFSEAPESFVMEFSPLKTKMKELRLKNVLLWP
RFRVEVSSCLNAINNEASQNKVIEVKVSFTNSMSQIQFGLMECLKKCIAELSRKNPELAL
EWWSIENALDVNFIRSIDSVMVPNWHRISYESKQLVKDIRFLRHLLKMLVSSDAVDFFGE
IQLSLDSNKPSVSRKYTESPWLLVDEAQLVISYAKKRIFHKENYNLEENPKWEQLIHILE
DIAYERTNKGLQGPTLIACSDNATCLQLARVLNSSSKRRGMREVLLNKLKWYRKHREETK
KLVKEVQSQDTFPENATLNVSSTFSKEQVVTKRRRTRGASQVAAVDRLRNSGTNVDMEEV
LEDQKLTEEIKKENSDKPHDGLEESGINDEEDLVNDSKIFELQEQEINEAFIHDNDNELA
NEEIDYAEELPKHVSVHFNKELWAEHCSEYEYVDREDEILVSTFKSLNDNCLLQEIMPSY
IIMFEPDISFIRQIEVYKAIVQELQPKVYFMYYGESIEEQSHLTAIKREKDAFTKLIREN
ANLSHHFETNEDLSHYKNLADRKLKLSKLRKSNTRNAGGQQGFHNFTQDVVIVDTREFNA
SLPGLLFRYGIRVLPCMLTVGDYVITPDICLERKSISDLIGSLQNNRLATQCKKMLKYYK
YPTLLIEFDEGQSFSLEPFSERRNYKNKDISTVHPISSKLSQDEIQLKLAKLVLRFPTLK
IIWSSSPLQTVNIILELKLGREQPDPSNAVILGTNKTRPYVNDNVSGGLNDGDNESKYKK
LLDVPGVSKIDYFNLRKKIKSFNKLQKLSWNEINELINDEDLTDRIYYFLRTEKEEQEQE
MKDYNSELLAKNMNDDALNDDDGDDDVLDAFM
NT seq 3339 nt   +upstreamnt  +downstreamnt
atgtcccagctattttatcagggtgattccgacgatgagttgcaagaggaactaactagg
cagacggttcaagcatctcaagattctcggaacgaaaataaagatgagagcatcgaagcc
gatcaccttgatgaggtgaccaatgagggctttaagcttttagacgaaggtgctgtgctg
tacccgctgataccgaatgaaccagatgacacggaaacgtccaagcctaacatagatgat
attaggccagtcgatattcaattgactttaccattatcatttcaacaaaaggttgtagag
agttcgttgattactgaggatgggttagttataatgggaaaagggttaggcctgctggat
atagtttccaatctgttacatgttctagctacaccaacctctattaacgggcaactgaag
agagcgctggtcctggtgctgaacgcaaagcccatagataacgtgagaattaaggaagcc
ttagaagagttatcgtggtttaccaatactgagactgacaaagatagcaccagtttggag
gatgatgacggtctttttgaaaggccatttagcgtagttaccgcagactccttaagtgtg
gagaaaagaaggaaattgtacatttccggtggtatcttgagcatcacctccagaattctc
attgtggatcttttgtctggtattgttcacccgaatagggttacgggtatgttggtacta
aatgcagactcacttcgacataattcaaatgaatcgtttatattagagatttatagatcc
aaaaatacttggggtttcattaaggccttttctgaagcaccagagtcatttgttatggaa
ttctcaccccttaagacgaagatgaaagagttgcggttaaagaacgttttattatggccg
cgattcagagtggaggtatcttcgtgtttaaatgctatcaataatgaagcatcacaaaac
aaagttattgaagtgaaagtatcatttacgaattccatgtcccaaattcaatttggattg
atggagtgcttgaaaaagtgtatcgctgaattgagtagaaaaaatcctgaattagcatta
gagtggtggagtatagaaaatgccctggatgtaaattttatcagatcaattgattcagta
atggtaccgaactggcaccggatctcttatgaatcaaaacaactggttaaggacatcaga
tttttacgccaccttttgaagatgctggtatcctccgatgctgtcgatttttttggggaa
attcaattgagcttggattccaacaaaccctcagtgtcccgaaaatatactgagtcgccg
tggttattggtggatgaagcacaactagtaatatcttatgcgaagaaaagaatctttcac
aaagaaaattataatctggaggagaatccaaaatgggaacaactaatacatatactagaa
gatattgcatatgaaagaactaataagggcttacaaggacctaccctaattgcttgttcc
gataatgctacctgtttacaattagcaagagttttgaattcttcaagcaaaagaagggga
atgcgtgaggtgcttttgaataagctgaaatggtatagaaaacaccgggaagaaacgaaa
aagctggttaaggaagtccaaagtcaagatacttttcccgaaaatgcaacattaaatgtc
agctcgacattttctaaagaacaagtggttacaaagagaagaagaacgcggggtgcttcg
caggttgcggctgttgacagactgagaaattcagggactaatgtggatatggaggaagtt
ttggaagaccagaagttgactgaagaaatcaaaaaggaaaatagtgataaaccgcatgat
ggactggaagaaagcggtataaatgatgaagaagatcttgtaaatgattcaaaaatattt
gagctacaagaacaagaaatcaatgaagcttttattcatgataacgataacgaacttgcc
aatgaagaaatagactatgcggaagaacttccgaaacatgtatctgttcacttcaataaa
gaattatgggccgaacattgcagtgagtatgagtatgtcgatcgtgaggatgaaatttta
gtctctactttcaagagcctcaatgacaactgcttattgcaggaaatcatgccttcttat
attataatgtttgaaccagatatctccttcattaggcaaattgaagtttataaggccata
gtacaagaattacaaccgaaggtgtattttatgtattatggtgagagtattgaagagcaa
agccatctgaccgcaattaaaagagaaaaggatgctttcacaaagttgatcagagagaat
gccaatctgtcgcatcactttgaaacaaatgaagatctttcccattataaaaacttggct
gacagaaaattaaaactctcaaaattacgaaaatctaacactagaaatgcgggtggacag
caaggatttcataattttactcaggacgttgtcattgtggatactcgtgagttcaatgct
tcattgccaggtttactctttcgatacggaattagagtccttccttgtatgttgactgtt
ggtgattatgtgataactccggatatttgtttagaaaggaaatcaatttcagatttaatt
ggttccttgcagaataatagattagcaacccaatgcaaaaaaatgctgaaatactataaa
tatcctactctgttaattgagtttgatgaaggacagtcgttttctttggaaccattcagc
gagagaagaaattataagaataaagacatatcaacggtgcacccgatatcaagtaaatta
tcccaagacgaaatacaattgaagctagctaagctggtattgaggttccctactctgaag
atcatttggtcttcttcgccactacaaactgtaaatataattctagaactgaaattgggc
cgtgaacagccagatcctagtaatgcagttatattgggcacaaataaaactagaccatat
gtgaatgacaatgtgtcggggggcttaaatgatggcgataatgagtccaaatataagaag
ttgctggacgttccaggagtgtcaaagattgattacttcaacctacgcaaaaaaatcaag
agcttcaataaacttcaaaagctctcgtggaacgagattaatgaactgattaatgacgag
gatttaacggatagaatatactacttcttgaggacagaaaaggaagaacaggagcaagag
atgaaggattataattcggaattgcttgccaagaacatgaatgatgatgctttaaatgac
gatgacggtgatgatgacgtgctggatgcatttatgtaa

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