Saccharomyces eubayanus: DI49_5444
Help
Entry
DI49_5444 CDS
T08138
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
seub
Saccharomyces eubayanus
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
seub03009
]
DI49_5444
Ribosome biogenesis [BR:
seub03009
]
Eukaryotic type
90S particles
Other 90S particles
DI49_5444
Pre-60S particles
Other pre-60S particles
DI49_5444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Cnd1
Motif
Other DBs
NCBI-GeneID:
28934580
NCBI-ProteinID:
XP_018219013
LinkDB
All DBs
Position
XVI:503180..506866
Genome browser
AA seq
1228 aa
AA seq
DB search
MDQDQVAFLLELEDKLAKIRFQATSKLENQKHVAIILTAVEENIVGQATNDISKNIVNYI
ISFMSLLDQAVDPSTHEIKDLQLASSSTYLLDLIFRYSPKPLLRSKFSEILTKIAPCITA
EKANAPLIRAAIGCLESLLIAQDAQAWNNTYDLNVTPKRGLLGILELSLDLRPKVRKRAL
DAVHAVLSNPPAAPTAEHVAAVFVADFCDKQLAGVLDDLSNLSNKQQKAQNTKEDINASV
MRSLRLVTSVISTGQWPSSQIEPLCDVLLGVTRSSEQYLVSASFECFESMFKAMAETTVS
SGLAENKYLRVLDTIFSLKPSNVDSLLTKAWIAVVVKGMSTYAVHQPLKALRKVPNVFRV
MSSYLASESTEVYQAAAQCLISILSDSIQDHLLLFTPDVDDKVFKNVDDIICQISKAFID
FLSIKYSHCSREILKVLAAAFNKFRYRSNPHFLKSLKIVDTWRVNEEQFMDLRNEVELVI
GASISAMGPEVVLAQAPLNLDNPSNERPGRAWMLPLIRDYTKNAKLSTFQNELAPYIKSF
QSKFDKVPEESIQLKVFQTIVDQIWSTLPRFCELPMDLRESFTDDFASELSSLLYSEVEL
RTTLCHALKVLAESNVLYSEGSLSDDVLLIQHFPISEAQKNIEYLSTKSTNLLAVLFNVY
TQTTPNARSYILETIDQYLKITSKEDIEKTFNNICGLLKNSMNEESSGNGNKEKKKPQLT
ATLLDLIICMTTYLPASSYSALFSIFGLTVSSPDALIQKRAYRIVTKLSEFESGSAAVAQ
FISDIENVMVDNTTTVQTSAKAARLAAIKTIVDLLPLDHLGFIVRTVAEVILSTKDVNEK
SRETAFDTLINMGKKMNEPNGIIKLSQVPGYDPTTPDQPSSVSEFFKIISAGLIGESQHM
VSSSITGYACLVFEFKNEMDSGILMDIYDTIELYLTSNSREIVKSAIGFTKVCVLGLPEE
VMRPKVPELLLKLLRWSHEHTGHFKAKVKHIIERLIRRFGYDYIEASFPEEDRKLLTNIR
KTRNRNKRKDEEVAPATEANAGNTTKGSRFMSAFDEAVYGSDNENGNESDQEENAAGGRR
KNGQKQFIVESGENPLDLLDSQTLAHISSTRPKKFNKNQNKGRFEDDTFNFDSEGKLVVK
GQAKPSTNADDPLSAVTSGINAYLEAVKSGPVRGQRNKLKFKKNGRDSDEFGDDGEKDDK
VMRRKVDPRNKIGKGGKRGPKFKSRKKL
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagatcaagtagcttttctattagagctagaagataagctggccaagatccgg
tttcaagcaacttctaaattagaaaatcaaaaacacgttgctataatattaacggccgtc
gaggaaaacattgtgggccaagctaccaatgatatttcaaaaaatatcgtgaactatatc
atttccttcatgtccttattggaccaagcagtggacccatctactcatgaaattaaagac
cttcagttggcttcttcttccacatatcttttggatctgatatttcgttactctccaaaa
ccgttgttaagatcaaaattctcggaaatacttaccaagattgcaccatgtattaccgct
gaaaaagcaaacgctcctttaattagagccgctattggttgtttagaatctcttctaatt
gctcaagatgctcaagcctggaacaatacctatgacctaaatgtcactccaaagagaggt
ttgctaggtatacttgaactttctttggatttgagaccaaaagttagaaagagagcacta
gatgcggttcatgcagtattatctaatcctcctgcggctccaactgcagagcatgtcgca
gctgttttcgtcgctgatttttgtgacaaacagttggcaggtgttctagacgacctgtcc
aatctatctaataaacaacaaaaggcccaaaatacaaaggaggatatcaacgctagtgtc
atgcgttcattgagattagtcacttctgttatctctaccggacaatggccatcctctcaa
atcgaacccctttgtgatgtattattaggtgtcactagaagctcagaacagtacctagtc
tctgcgtcatttgaatgttttgaaagtatgttcaaagctatggcagaaaccaccgtttct
tcaggtttagctgaaaacaagtatctgagggttctagataccatcttttcactgaaacct
tcaaatgtggacagtctactgaccaaggcttggatcgctgttgtagtcaaaggtatgtct
acgtatgcggttcaccaaccattgaaagccttacgtaaggttcctaatgtgtttcgtgtt
atgtcctcttatttagcaagtgaatctacagaagtatatcaagctgccgctcaatgcctt
atctcaatcctttctgactctattcaagaccatttgttattgtttacaccagatgtagat
gacaaggttttcaaaaatgtcgatgacattatatgccaaatttcaaaagcctttatcgac
ttcttatccattaaatattctcattgttccagagaaattctgaaagtgttggcagcagcc
ttcaacaaattcagatatagatccaaccctcactttttgaaatccttgaaaattgttgat
acctggagagtaaacgaagaacagtttatggacttgagaaatgaagttgaattagtaatt
ggtgcctccatttccgctatgggccctgaagttgtccttgcccaagcgccactcaatttg
gacaacccatccaatgaaagacctggtagagcttggatgttgccacttattagagactat
accaaaaatgccaagctctctactttccaaaatgagctggcaccatacatcaaaagtttt
caatctaaattcgataaagttccagaagaatctattcaactgaaagttttccaaaccatt
gtcgatcaaatctggtccacattaccacgtttctgtgagttaccaatggacttgagagaa
tctttcacagacgactttgcatcagaactatcttcgctgctgtacagtgaagttgaatta
agaactacattatgtcatgctcttaaggttttggcagaaagtaatgtcttgtattcagaa
ggttccctttctgatgatgtcttattgatacaacacttccctatttctgaagcacaaaag
aatatagaatacctgtcaaccaaatcgaccaaccttttagcggtcttgtttaatgtttat
actcaaaccactccaaacgcaagaagttatattctggaaacgattgatcaatatttgaaa
atcacttcaaaagaagatatagaaaagacctttaataatatttgtggtcttttgaagaat
tctatgaatgaagaaagtagtggaaatggcaacaaagaaaagaaaaaaccccaattgaca
gccacattattagatttgatcatttgtatgacaacatacttacctgcttcctcttattcc
gctttattttctatattcggtcttactgtgagttctcccgatgcattaattcaaaagaga
gcttatagaatcgttaccaagctttctgagtttgaatctggttcagcagctgtcgcccag
tttatttccgatattgaaaatgttatggtagacaacactactactgttcaaacatcagct
aaagctgcgagattggcagcaatcaagactatagtggatttgttacctttggatcatctc
ggttttattgttagaactgtagccgaggtcatcttaagcactaaggatgtgaacgaaaaa
tccagagaaacggcttttgacactttgattaatatgggtaaaaaaatgaatgagccaaat
ggtatcatcaagctatcccaagtacctgggtatgaccctactactccggatcaaccatca
tcagtgtcagagttttttaagattatttctgctggtcttattggggaatctcaacatatg
gttagtagctcgattactggttacgcatgtttagtttttgaattcaaaaatgaaatggat
tctggtattctaatggacatttacgataccattgaactgtacctgacttccaattccaga
gaaattgtaaagagtgccatagggttcacaaaggtctgtgtcttgggtcttccagaagaa
gtgatgaggccaaaggtgccagaattgctattaaagttattgagatggtcccatgaacat
acaggtcactttaaagccaaggtcaagcatattattgaaagattgataagaagatttgga
tatgactatattgaagccagcttccctgaggaagacagaaaattattaacaaacataaga
aagacgcgtaatagaaacaagcgtaaagatgaggaggttgctcccgcaactgaagctaac
gctggaaacaccacaaagggttcaagatttatgtctgcttttgacgaagctgtttatgga
tctgacaatgaaaatggtaacgagtcagaccaagaggaaaatgcagctggaggcagaaga
aagaatgggcaaaagcaatttattgtggaatctggtgaaaatccactggatttgttagat
tctcaaacattagcacatatttcatctactagaccaaagaaattcaataagaatcaaaat
aagggtaggtttgaagatgacaccttcaatttcgactcagaaggtaaattggtcgtcaag
ggacaagctaaaccctctacgaatgctgatgatccactaagcgcagtcacaagcggtatc
aatgcgtacctagaagccgtaaagagcggtccagtaagaggtcaaagaaacaaattgaag
tttaaaaagaatggaagagattctgacgagttcggtgatgacggtgaaaaggatgataag
gtaatgagaagaaaagtagatccaagaaacaagatcggtaaaggtggtaaaagaggccct
aaatttaaatccaggaagaagttatag
DBGET
integrated database retrieval system