Saccharomyces eubayanus: DI49_5524
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Entry
DI49_5524 CDS
T08138
Name
(RefSeq) NOT5-like protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
seub
Saccharomyces eubayanus
Pathway
seub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DI49_5524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_5524
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DI49_5524
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
DI49_5524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
28934660
NCBI-ProteinID:
XP_018219088
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All DBs
Position
XVI:672717..674414
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AA seq
565 aa
AA seq
DB search
MSQRKLQQDIDKLLKKVKEGVEDFDDIYEKFQSTDPSNSSHREKLESDLKREIKKLQKHR
DQIKTWLSKEDVKDKQNVLMTNRRLIENGMERFKSVEKLMKTKQFSKEALTNPDIIKDPK
ELKKRDQVVFIHECLDELQKQLEQFEAHENEEQTERHEFHIANLENILKKLQNNEMEPEP
VQEFQDDIKYYVENNDDPDFIEYDTIYEDMGCEIQPSLVNNSEAPKEAPKEANNQSSVSS
IRSTKKQERSPKKKVPLKQTSTLDTVENSSAQAAESVSQSASPSPTPVSIDTPLNTVKDD
TMKLDDSFHSPPATNVSMKKKESENDSEEQLSFPQDRTEEIQKIIQNDIETNPAFQNPLF
SDELKYWLDSKKYLMQPLQEMSPKMVSQLESSLLNCPDSLDADSPCLYTKPLSLPHPTSI
FFPSEPIRFVYPYDVPLNLTNSENDTTDKFDKDGKIKSKKHDDIYSRTSLARIFMKFDLD
TLFFIFYHYQGSYEQFLAARELYKNRNWLFNRVDRCWYYKEIEKLPPGMGKSEEESWRYF
DYKKSWLARRCGNDFVYNEDDFEKL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagagaaaactacaacaggatattgataagcttttgaagaaagtgaaagaaggt
gttgaagatttcgacgacatatatgaaaaatttcaatctacagacccctcaaactcatcg
catagagaaaagctagaatcagacctgaaaagagagataaaaaaactacaaaaacatagg
gaccaaataaaaacatggctaagcaaagaggacgtaaaggataagcagaacgtgctgatg
acaaatagaaggctcatcgaaaatggcatggaaagattcaagtccgtggagaaattgatg
aaaacgaaacaattttccaaagaagccttgacgaatccagatataatcaaggatcctaaa
gaacttaaaaagagagaccaagttgtgttcattcatgagtgtttagacgagctacaaaag
caactagagcagttcgaggctcacgagaatgaggaacagacagaaagacacgaatttcat
atcgccaatttagaaaatatcttgaagaaacttcaaaataatgaaatggagccagaacct
gtgcaagaattccaagacgatattaaatactatgttgaaaataacgatgatccggatttc
atcgagtatgatacaatttacgaagacatgggttgcgaaatccaaccttcattagttaat
aatagtgaggctcctaaagaagctcccaaagaagcaaacaatcaatcttctgtatccagt
attcgttcaacaaaaaaacaagagcgttctcccaagaaaaaagtcccactaaagcagact
tccacgctggatacggtggaaaattcatcggcacaagctgctgaatcggtttctcaatcg
gcgtctccttctcctacgcctgtatcaatcgacacgccattgaatacagtcaaagatgat
acaatgaagctggatgattccttccacagtccaccagctaccaatgtatccatgaaaaag
aaagaatccgaaaacgattctgaggaacaattgagttttccgcaagatagaacggaagaa
atccaaaaaattattcaaaacgatatagaaacgaacccagcctttcaaaatccgttattt
agcgacgaattaaaatactggttagactcgaaaaagtacctgatgcaacctcttcaagaa
atgtcgccaaaaatggtatcacaactagaatcctctcttttaaattgtcctgattcatta
gatgctgattcgccatgtctttatacaaaaccgttatctttacctcatccaacgtcaata
tttttccccagtgagccaatccgatttgtctatccctatgatgtgcccttaaatttaaca
aatagcgaaaacgacacaaccgataagttcgataaggacggtaaaataaaatcgaaaaag
catgacgatatctattctagaacttctttagcaagaatattcatgaaattcgaccttgat
actttgtttttcatattctatcattaccaaggttcctatgaacaatttttagccgctaga
gagctttacaaaaatagaaactggttatttaacagagtcgaccgttgttggtactataaa
gagatcgaaaaattgccaccaggaatgggcaaatctgaagaagaatcttggagatatttc
gattataaaaagagttggttagcgagacgctgcggaaatgattttgtatataatgaagat
gattttgaaaagctgtaa
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