KEGG   Saccharomyces eubayanus: DI49_5551
Entry
DI49_5551         CDS       T08138                                 
Name
(RefSeq) YTH1-like protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
seub  Saccharomyces eubayanus
Pathway
seub03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    DI49_5551
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:seub03021]
    DI49_5551
   03019 Messenger RNA biogenesis [BR:seub03019]
    DI49_5551
Transcription machinery [BR:seub03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     DI49_5551
Messenger RNA biogenesis [BR:seub03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     DI49_5551
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH_3 DUF4905
Other DBs
NCBI-GeneID: 28934687
NCBI-ProteinID: XP_018219115
LinkDB
Position
XVI:complement(724360..724986)
AA seq 208 aa
MSLIHLDTAKYPFKFEPFLRQEYSFSLDPDRPICEFYNSREGPKSCPRGPLCPKKHVLPI
FQNKIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYCTQSPDCQYLHIDPASK
IPKCENYEMGFCPLGNTCPRRHIKKVFCQRYMTGFCPLGKDECDMEHPQFIIPDEGSKLR
IKKDDEINTRKMDEEKERRLNAIINGEV
NT seq 627 nt   +upstreamnt  +downstreamnt
atgagtttaattcaccttgatacagcaaagtatccttttaaatttgagccctttctcagg
caagagtactcgttttcactcgatcccgatagacctatatgtgaattttacaactcgaga
gaaggccccaaatcgtgtcccagagggcccctatgtcccaaaaagcacgtattacccatt
ttccaaaataaaatcgtttgcaggcattggcttcgtggattatgcaagaagaatgaccaa
tgtgaatacttacatgaatacaatcttcggaaaatgcctgaatgtgtgtttttcagcaaa
aacgggtactgcacgcaaagtccagactgccaatatctacatatagatccagccagcaag
atacccaaatgtgagaattacgaaatgggattctgccctctagggaatacttgccccagg
cgacatattaagaaggtgttttgccaacgatatatgaccgggttttgtcctctgggtaaa
gacgaatgtgacatggagcatccacagtttataataccggatgaaggtagtaaattaaga
ataaaaaaagatgatgagataaataccagaaaaatggatgaagaaaaggagaggcgttta
aatgctatcatcaacggggaagtttaa

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