KEGG   Saccharomyces eubayanus: DI49_5618
Entry
DI49_5618         CDS       T08138                                 
Name
(RefSeq) VPS4-like protein
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
seub  Saccharomyces eubayanus
Pathway
seub03250  Viral life cycle - HIV-1
seub03272  Virion - Hepatitis viruses
seub04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    DI49_5618
   03272 Virion - Hepatitis viruses
    DI49_5618
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    DI49_5618
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:seub04131]
    DI49_5618
   03400 DNA repair and recombination proteins [BR:seub03400]
    DI49_5618
Membrane trafficking [BR:seub04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    DI49_5618
DNA repair and recombination proteins [BR:seub03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    DI49_5618
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_16 RuvB_N AAA_5 AAA_14 AAA_22 TIP49 RNA_helicase DUF815 IstB_IS21 NPHP3_N AAA_17 AAA_18 AAA_25 AAA_24 AAA_2 nSTAND3 AAA_33 AAA_7 Torsin Parvo_NS1 AAA_28 Mg_chelatase DUF5906 PhoH ResIII NACHT bpMoxR
Other DBs
NCBI-GeneID: 28934754
NCBI-ProteinID: XP_018219174
LinkDB
Position
XVI:complement(844566..845879)
AA seq 437 aa
MSTGDFLSKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLALKYEKNPKSKELIRAKF
TEYLNRAEQLKKHLETDETSGGKKSPSAGSGSTSGNKKISQEEGEDNGGEDNKKLRGALS
SAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTTGILLYGPPGTGKS
YLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGT
RGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPD
LAARTTMFEINVGDTPCLLTKEDYRTLGGMTEGYSGSDIAVVVKDALMQPIRKIQGATHF
KDVSTEQDDSKKLTPCSPGDDDAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNED
DLLKQEQFTRDFGQEGN
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgagtacgggagattttttgagcaaggggatagagctggtccaaaaggccattgatttg
gacacggcaacgcagtatgaagaggcttatacggcgtactacaacggattagactatttg
atgctggctttgaagtacgaaaagaaccccaagtcgaaggagttgataagagcaaagttc
acagagtatctgaaccgtgcagagcaattgaagaagcatttggaaactgacgagacaagt
ggggggaagaagtcccctagtgccggtagtggttccacgagtggtaataagaaaatctcg
caagaggaaggtgaggataacggtggtgaagacaacaaaaaactaagaggtgctctatcg
agtgccatcttatccgagaagcctaatgtcaaatgggaagacgtggctgggctggaagga
gctaaggaggcccttaaagaagccgttatcttgcctgtgaagttcccacatttgttcaaa
ggtaatcgtaagcccacaacaggaattttattatacggaccaccgggtacgggtaaatcg
tacttggcgaaagctgtggccaccgaggctaattctactttcttcagtgttagttctagt
gacttggtctctaaatggatgggtgaatctgaaaaactggtgaaacagttgtttgccatg
gcaagagagaacaagccttctatcatcttcattgatgaagtggatgcgcttacaggaacc
agaggtgagggggaaagtgaagcaagcagaagaattaaaaccgagttgctagtacaaatg
aatggtgtaggaaatgattcccagggcgtattggtcctcggtgccacgaacattccatgg
caactagacagtgccatcagaagaagatttgaaagaagaatatacataccattgccagat
ttagcggccagaaccactatgttcgagattaacgtcggcgacaccccctgcttgttgacc
aaagaagattatagaactttgggtgggatgactgaaggttattctgggagtgatattgcc
gtggtggtaaaagatgctctgatgcagccaataaggaagattcagggcgccactcatttc
aaggatgtgtctacagagcaagatgattcaaagaaactaacgccgtgctctcccggtgat
gatgacgccattgaaatgagttggactgatatcgaagctgacgaactaaaagaacctgac
cttaccataaaggatttcttgaaggccatcaagtcgacgagacctactgttaacgaggat
gatttgctgaaacaagaacagttcacaagagattttggccaagaaggtaactaa

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