Shewanella eurypsychrophilus: FM038_000010
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Entry
FM038_000010 CDS
T07746
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur03030
DNA replication
seur03430
Mismatch repair
seur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FM038_000010 (dnaN)
03430 Mismatch repair
FM038_000010 (dnaN)
03440 Homologous recombination
FM038_000010 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seur03032
]
FM038_000010 (dnaN)
03400 DNA repair and recombination proteins [BR:
seur03400
]
FM038_000010 (dnaN)
Enzymes [BR:
seur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FM038_000010 (dnaN)
DNA replication proteins [BR:
seur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FM038_000010 (dnaN)
DNA repair and recombination proteins [BR:
seur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FM038_000010 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
PglD_N
Motif
Other DBs
NCBI-ProteinID:
QPG55995
LinkDB
All DBs
Position
1412..2512
Genome browser
AA seq
366 aa
AA seq
DB search
MKFSIDRDALLKPLQLVNGAVERRHNLPILANLLVEVSGHSLKMTGTDLEVELVGQVELV
GDVQEGRTTVPAKKFLDIVKSLPDQVELKIEQQENRLLLRSGRSRFTLATLPAEEYPNVE
AFESDIEFTIKQGILKSLIDATQFSMANQDVRYYLNGLLLETDGNVLRAIATDGHRLALS
HRQIEATLPEKQVIVPRKGVVELQRLFEGEDLDVTIAIGDNAIRATTSSAVLTSKLVDGR
FPDYRRVLPKGGDKIVIASRNQLKQALVRASILSNEKFRGVRVQLENNLIKITANNPEQE
EAEEILDVEYDNTPLEIGFNVSYLLDVLNNLPSDDVRITLIDGNSSALIENHIEEDSMYV
VMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttcaattgatagggatgccctattaaagccgttgcaattggttaatggagcg
gtggagagacgacataacttgcctattttggcaaaccttttagttgaagtaagtggtcac
tcacttaaaatgaccggtaccgaccttgaagtcgaattagtcggccaagttgaattggtt
ggcgatgttcaagaggggcgtacaaccgtcccggcgaagaaattcctcgatatcgttaaa
tccctaccagatcaagttgaacttaaaattgaacagcaggaaaaccgtctgctgctcaga
tctggccgtagccgctttacgttagcgacattaccggcagaagagtatcccaatgtcgaa
gctttcgagtctgatattgaatttaccattaagcagggcatactcaaatcgcttatcgat
gcgactcagttttccatggctaaccaggatgtgcgttattatctgaacggtctgttattg
gaaaccgatggcaatgtgttgcgtgccattgcaaccgacggacatcgcttagccttgagt
catcgtcaaatagaggcgactctgccagagaagcaagtgattgtgccccgtaaaggcgtc
gtagagctacagcgtctgttcgaaggcgaagacttagatgtgactattgccataggtgat
aatgccatacgcgcgacgacatcgagtgcagtgctgaccagtaagttagtcgatggtcgt
ttccccgattatcgtcgagtcttgcctaaaggtggcgataaaatcgttatcgctagtcga
aaccagctaaagcaggctttggttcgcgcctctattctgtcaaatgagaagttccgcggt
gtgcgggtacagctggaaaataacctgattaagatcaccgctaacaatcctgagcaggaa
gaagctgaggagatcttagacgtagagtatgacaacacccctctagagattggcttcaac
gtaagttatctgttggatgtgctcaataacctaccttcagatgatgtgcgcatcacgctt
atcgatggcaactccagtgcgttgatcgagaatcatattgaagaagactctatgtatgtg
gttatgccgatgaggctctag
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