Shewanella eurypsychrophilus: FM038_000015
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Entry
FM038_000015 CDS
T07746
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FM038_000015 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seur03400
]
FM038_000015 (recF)
DNA repair and recombination proteins [BR:
seur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FM038_000015 (recF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_27
AAA_13
AAA_29
AAA_16
ABC_tran
ATPase_2
Septin
DUF4899
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QPG55996
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All DBs
Position
2910..4007
Genome browser
AA seq
365 aa
AA seq
DB search
MSLTRLHIETFRNIASAQLLPAEGINLIYGQNGSGKTSILEAIYFLGMGRSFRSHLSQRV
IQHSDDKLTLFANLNVQDKESKIGLRRFRSGETEVKIDGDKVKRLSTLAESLPIQVITPE
SFALLFEGPKSRRQFIDWGAFHCDKTFHSAWINVKRILKQRNQLLKNEASYAQIQYWDRE
LVRYSEVVTDIRTQYVNSLNELLKGIIEEFLPKIDVKISFTRGWDSKTDYAQLLETQYPR
DVSSGNTASGPHKADLRLRVGTLPVQDALSRGQLKLLVCALRIAQGKLLKQQIDKNSIYL
VDDLPSELDAKHRQLLLQQLIDTGAQVFVTAIEPAAILDSLNTPPSKVFHVELGRVTVIE
QPTRE
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgacgcgtcttcatattgaaacttttcggaatatcgcctctgctcaactgctt
ccggccgaaggaattaacctcatttacggtcagaatggcagtggcaaaaccagtatttta
gaagctatctattttcttggtatgggccgctcatttcgcagtcatctttcccagcgagtg
attcaacactcagatgataagttaaccttattcgctaacttaaatgtgcaggataaagag
agcaaaattggcttgagacgatttcgcagcggtgagaccgaggtcaagattgatggcgat
aaggtcaaacgattatcgaccttggccgagtctttgccgatacaagtgatcactcccgag
agttttgccttgctgtttgaagggcctaagtcgaggcgtcagtttatcgattggggagcg
tttcattgtgataaaactttccattcggcctggatcaatgtaaagaggattttaaagcaa
cgaaatcagctgcttaaaaatgaggctagctacgctcagattcaatattgggatagagag
ttagttcgttattctgaagtcgtgaccgatatcagaactcaatatgtaaactcgttaaat
gagctacttaagggtataatcgaagagtttttacctaagatcgatgtgaagatttctttt
acccgaggttgggatagtaaaacagattatgcgcagctcttagagacgcaatatcccaga
gatgtatctagcggcaataccgctagcggtccccataaagccgatttgagattacgtgtt
ggcaccttgccagttcaggatgctttatcccggggacagcttaaattgttagtctgtgca
ctgcgtattgcacagggaaagttacttaagcagcaaatagataagaatagtatttatctg
gtggatgatcttccatcggaattggatgcaaagcacaggcaattgttgctgcagcagtta
atcgataccggcgcacaagtttttgtcaccgccatcgagcctgcagcgatactagattcg
ttaaacacgccaccgagtaaggtgttccatgtggaactggggcgtgtaacggtaattgaa
caaccgacgagagaataa
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