Shewanella eurypsychrophilus: FM038_000190
Help
Entry
FM038_000190 CDS
T07746
Name
(GenBank) collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
seur
Shewanella eurypsychrophilus
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
seur01002
]
FM038_000190
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
seur02042
]
FM038_000190
Enzymes [BR:
seur01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
FM038_000190
Peptidases and inhibitors [BR:
seur01002
]
Metallo peptidases
Family M9
FM038_000190
Bacterial toxins [BR:
seur02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
FM038_000190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Motif
Other DBs
NCBI-ProteinID:
QPG56027
LinkDB
All DBs
Position
complement(41012..42784)
Genome browser
AA seq
590 aa
AA seq
DB search
MLRKSVLALAIALPTLVGLSACSTSPQIITDTSLLQKITQASDESLFDASSPLLTQSAFE
QVAARLDTTASLSEANSLLYYLRAFSYFGPIDDLDDNSIVLLTSGLTSLTSTDVFASSAR
LQEQFAVTLYRYYANNEQASALVTLTTILDKQFGQLAKSASDQEHDYALWETLRAYGLLF
NVARKDSDGELNKTLLELGLDKTLLDFAGSDNSIRNDKGWPKRNAYWALGLYRLALPASE
DGSVTQDEAALDKAVADIAKQDISVRGDTAKDAYTLGYHVNSFAGLEECEKNSDICRIPE
QSEILPIEHHCSDSLFILAQDLNEQELAISCTKLTSQESNFHTLLETSEQPTANDFNDAL
RVIAFKNWSQYNAYGQLLFDISTDNGGMYIEGTPSKPGNQATFFAYRQFWIEPEFAIWNL
NHEYVHYLDGHFIKYGGFGHFPEKMVWWSEGLAEYISKGDDNAKTLRIVKKKLDEAPTLE
EIFATEYKDGLERTYSWSYMAIRFLAENYHKDFVQLSKYLKTDYFEGYDELLADLTQHQN
EFSHWLSDRAEQFDDSEDQAKPRLHKQNRYSYRDYLAPEHLKKDDAHRHY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcaagtcagttctggctctagcgatagctctccctacgcttgtagggctatcg
gcttgtagtacctcacctcaaatcatcacagacacgagtctattacagaaaattactcag
gcatcagatgaaagcctattcgatgccagtagcccgctgctgactcaaagtgccttcgag
caagttgcggctaggttggacactacagccagtttatctgaagccaacagcctactctat
tatttaagagcctttagttacttcggtccaatagatgatttagatgacaacagcattgta
ttgctgacatcaggattaaccagcttaacttctacagatgtttttgcttcatctgctcgg
ctgcaagaacaatttgccgtcaccctgtatcgctactacgccaacaatgaacaagcgagt
gcactagtaacattgaccactattctcgataaacaatttggccaactagctaagagtgcc
agtgatcaagaacatgattacgccctatgggaaacgcttcgggcttacggcttgctattc
aatgtcgcgagaaaggacagtgatggtgagctaaacaaaacactgctagagctgggactc
gataaaactttattggactttgcaggctcagataacagcattcgtaatgataaaggctgg
cctaagcgtaacgcttactgggctctgggcctataccgcttggcgctaccagccagtgag
gatggcagcgtcactcaagatgaagcagctttggataaggccgtagccgatatagcaaag
caagatatcagcgtcagaggcgatacggcaaaggatgcctataccttaggctatcacgtc
aactcatttgcaggattagaggagtgtgagaaaaatagtgatatctgccgtatccctgag
cagagcgaaattctgcctattgaacatcactgttcagacagcctatttattcttgcgcaa
gatctgaatgagcaggagctggccatcagctgtactaagctcacttctcaggaatctaac
ttccacactttattagaaaccagtgaacagccaacggctaacgattttaatgatgctctc
agagtcatcgccttcaagaactggagccaatataacgcttacggccagctgttattcgat
ataagcacagacaatggtggcatgtatatagagggaactccctctaaaccaggtaatcag
gcaactttcttcgcttatcgtcagttttggatagagcctgaatttgctatctggaatctc
aatcacgagtacgtgcattacctggacggacacttcatcaagtatggaggcttcggtcac
ttccctgaaaaaatggtgtggtggtcagaaggtttagccgaatacatctctaagggagat
gacaacgctaaaactttgagaatcgtaaagaagaaactagacgaagcacccacgctggaa
gagatcttcgccaccgaatataaagacggtttggagcgaacttatagctggagctatatg
gccattcgattcttggccgaaaactaccacaaagacttcgttcaactgagtaagtacctt
aaaacagactatttcgagggctatgatgagttacttgctgatttgactcagcatcaaaat
gagtttagtcactggctatcggatcgagcagagcagtttgatgatagtgaagaccaagct
aagcctaggctgcacaaacaaaatcgctacagttatcgtgattacttagcccctgaacac
ctcaaaaaggatgatgcacacaggcattattaa
DBGET
integrated database retrieval system
