Shewanella eurypsychrophilus: FM038_001230
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Entry
FM038_001230 CDS
T07746
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
seur
Shewanella eurypsychrophilus
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seur03021
]
FM038_001230 (rpoH)
Transcription machinery [BR:
seur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FM038_001230 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
UCR_14kD
Sigma70_r1_2
Fe_dep_repress
GntR
Motif
Other DBs
NCBI-ProteinID:
QPG56200
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Position
277315..278175
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AA seq
286 aa
AA seq
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MTNQTQSMTLAVPQTSGSLEAYVHSAHNISMLEAGQEYDLAKRLQETGDLQAAKKLIMSH
LRFVVHVAKGYSGYGLPQADLIQEGNIGLMKAVKRFDPDVGVRLVSFAVHWIKAEIHEFV
LKNWRIVKVATTKAQRKLFFNLRKSKKRLGWFSDAEVGMVAENLGVSKADVTEMESRMAA
QDPAFDLTSDSDDDNQDYAPALYLEDHSSDLASQVETDDLEASNQARLLSAIKTLDERSQ
HILQARWLSEDKTTLQELAATYQVSAERIRQLEKNAMNKLKGRMET
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccaaacgcaatcaatgacgttagctgttccccaaacaagtggcagcttagaa
gcttatgttcactcggcacacaacatctcaatgttggaagctgggcaggagtatgacttg
gctaaacgtttgcaagaaacgggtgatctacaagcagcgaaaaagctgattatgtctcat
ctacgtttcgttgttcatgttgctaaggggtattccggttacggtttgcctcaagccgat
cttattcaagaaggtaatattggtctgatgaaggcggttaagcgtttcgatcctgatgtt
ggggtgcgcttggtttcttttgccgtacattggattaaagccgaaatacatgagtttgtg
cttaaaaactggcgtattgtcaaagtagcgaccactaaggctcagcgtaaattattcttt
aatcttcgtaaatcgaagaagcgtcttggttggtttagcgatgcagaagtgggtatggtt
gctgaaaacttaggtgtgtctaaggccgatgtgaccgagatggagtcgcgtatggcggca
caagatcccgcattcgaccttactagtgatagcgatgatgataaccaagattacgcgcca
gcgctttatcttgaagatcactcttcagaccttgctagtcaggttgaaactgatgactta
gaagctagcaaccaggctcgcttgttatcagcaattaaaacactcgatgagcgtagtcag
catatcttacaggctcgctggttaagtgaagataaaacgactctgcaagagttagccgca
acgtatcaagtatctgccgagcgtatcaggcagcttgagaaaaatgcgatgaataagctt
aaaggtcgaatggaaacttag
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