Shewanella eurypsychrophilus: FM038_001415
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Entry
FM038_001415 CDS
T07746
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
seur
Shewanella eurypsychrophilus
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
seur03000
]
FM038_001415
Transcription factors [BR:
seur03000
]
Prokaryotic type
Helix-turn-helix
Other families
FM038_001415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
AAA_5
AAA_3
PAS_4
HTH_30
AAA_2
PAS
HTH_22
Mg_chelatase
HTH_7
Diguanyl_cycl_sensor
HTH_23
nSTAND6
IclR_C
AAA_7
HTH_17
HTH_50
Motif
Other DBs
NCBI-ProteinID:
QPG56235
UniProt:
A0ABX6V0X3
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Position
317751..319541
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AA seq
596 aa
AA seq
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MTLKLSTQQLNMQHWLSDSWLRSQGAGLSEASNPEEMRLDRGALEDRHFHHKQLIELVQK
HALPLFSQLMSHTKSRLILSDSEGYVLCHWGVSQYSDKLANVALDVGVNWQEQHKGTNAI
GTALTAQQTISVVGEQHFIKQHRFMSCTASPIFSPSGELIAAIDITTEQQKHTQQTLLLV
SSLAQQVETALLCHLPHSHYRIDLAEEASLIHSGWQGIVIADSEGKILGTNSMAKKLLHA
PSLGEDIGRYIGNKWSENDAISQHRELHLKTQAIKPTKPQVLGHQVAVRFKDPKLERAWQ
QANKVVSRCIPLLVLGETGVGKEQFVTKLHSQSQRRNQSLVAVNCAALPADLVESELFGY
QAGAFTGANRNGYLGKIRQADGGFLFLDEIGEMPLATQSRLLRVLQEKEVTPVGSNRSYK
VDIQIVAATHTDLQQQVDNGQFRLDLFYRLNGLQVTLPPLRLRSDIERIIHKLHRKYRVR
EQCISRPLLEKLLAYQWPGNLRELDNLMQVVCLLSEGEAEISWQHLPDHLQQTLAQEPVD
LVCDTDLEGRELENVVNSNIIASYAQFQGNVTQCAKHLGVSRNTLYRKLKVLGIKS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgacactaaagctcagcactcagcaattaaatatgcagcattggttatctgattcttgg
cttcgtagtcagggagcgggtttatctgaggctagcaaccctgaagagatgagattagat
cgcggcgcgttggaagatcgtcatttccatcataaacagctcatcgagctggttcaaaag
catgcacttcctctttttagtcaacttatgtcgcacaccaagagtcgattgatcttgtct
gatagcgaaggttatgtgctttgccattggggggtgagtcagtattcggacaaattagct
aacgttgccttagatgttggtgtcaactggcaagagcaacacaaaggcactaatgccatt
ggaacagcactaacggcacagcaaacgatctctgtggtaggtgagcagcactttatcaag
caacatagatttatgagctgcactgccagcccaatcttctcgccttctggtgaattgata
gccgctatcgatataaccactgagcagcaaaaacacactcaacagaccttacttttagta
tctagtttggcacagcaagttgaaactgctctactctgtcatctgccacatagtcactac
cgtatagacttggccgaggaggcttccttgatacattcaggttggcaggggatcgttatt
gcagacagtgaaggtaagatcttgggcaccaattctatggcgaagaaactgctgcatgcg
ccaagcttaggcgaggatattgggcgctacataggtaacaagtggtcagaaaatgatgct
atatctcaacatagagaactgcatttaaaaacccaagcgattaagccaactaaacctcag
gtattggggcatcaagtcgcggtgcgctttaaagaccctaaattggagcgtgcatggcag
caagcaaacaaggtggtgagcagatgtattccgctactggtattgggtgagacaggggta
gggaaagagcaattcgtgactaagttgcatagtcaaagccagcgtcgaaaccagtcgcta
gtagcggtcaattgcgccgccttacctgcagatttagttgaatctgaattgttcggttat
caggcgggtgcctttaccggggcgaatcgaaatggctatctaggaaaaattcgtcaagct
gatggtggctttttgttcttggatgaaatcggtgagatgcccctggcaacgcaaagtcgt
ctgttgcgagtattacaggagaaagaggtgactcctgttggcagtaaccgttcttataag
gtggatattcagattgttgctgcaactcatactgatctgcaacagcaggtcgataatggc
cagtttaggctggatctattttatcggctcaatggcttacaagtgaccctgccgccctta
aggttgcgtagtgatattgagcggattattcataaattgcatagaaaatatcgagtcaga
gagcagtgcatctcaaggccacttctggagaagttgttggcctaccaatggcctggaaac
ttacgtgagttggataacttaatgcaggtggtatgtttactatccgaaggggaggctgag
attagctggcaacacttaccagaccatttacagcaaacattggctcaagaaccagtagat
ctcgtatgcgatacagatctagaaggtcgtgaattagagaatgtggttaatagcaatatc
attgcctcctatgcgcagtttcaggggaatgtgactcaatgtgctaagcatttgggcgtc
agtcgcaataccctttatcgcaagctaaaagtattaggcattaagagttaa
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