Shewanella eurypsychrophilus: FM038_001940
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Entry
FM038_001940 CDS
T07746
Symbol
ampD
Name
(GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
KO
K03806
N-acetyl-anhydromuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
seur
Shewanella eurypsychrophilus
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
seur01011
]
FM038_001940 (ampD)
Enzymes [BR:
seur01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
FM038_001940 (ampD)
Peptidoglycan biosynthesis and degradation proteins [BR:
seur01011
]
Peptidoglycan biosynthesis and degradation
Amidase
FM038_001940 (ampD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_2
Motif
Other DBs
NCBI-ProteinID:
QPG56314
UniProt:
A0A550ABJ6
LinkDB
All DBs
Position
443968..444531
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AA seq
187 aa
AA seq
DB search
MLIKPKRVPEFESGWAVGVKRRESPFFNHRPANEVSLLVIHNISLPAGCFGLPYIDQLFL
GCLDVEADPSFIDLKGLEVSAHFLIRRDGEVIQYVSCDERAWHAGVSNFDGRSGCNDFAI
GIELEGTDFEAYTQAQYDELLQLTLGLQTQYPSLGVDNIVGHSDIAPGRKTDPGDSFDWS
WFKKRLI
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
ttgttgataaaacctaaacgtgtacctgagtttgaaagtggatgggcggttggggttaag
cgacgcgagtctccattttttaatcatagacctgctaatgaggttagcctattagtcatc
cataacattagcttgccagctgggtgttttggactgccttatatcgatcaacttttttta
ggctgtttagatgttgaagcagatcctagttttatcgatttaaagggattagaggtctct
gcgcactttcttattcgaagagatggcgaagtgatccaatacgtgtcttgtgatgagcgt
gcctggcacgccggggtatcgaattttgatggcagaagtggctgtaatgattttgctatt
ggtatagaactcgaaggaacagatttcgaagcgtatactcaagctcaatatgatgaatta
ttacaactcacactgggcttacagactcaatatccaagcttaggtgtagacaacatcgtc
ggccatagtgatatcgcaccgggtcgaaaaacagatcccggtgacagtttcgattggtct
tggtttaagaaacgtttaatttaa
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