Shewanella eurypsychrophilus: FM038_002455
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Entry
FM038_002455 CDS
T07746
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FM038_002455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
seur02000
]
FM038_002455
02044 Secretion system [BR:
seur02044
]
FM038_002455
Transporters [BR:
seur02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
FM038_002455
Secretion system [BR:
seur02044
]
Type I secretion system
Adhesin protein transporter
FM038_002455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Peptidase_C39
AAA_15
AAA_29
AAA_13
MMR_HSR1
nSTAND3
AAA_22
AAA_23
NACHT
DUF87
AAA_24
Motif
Other DBs
NCBI-ProteinID:
QPG56403
LinkDB
All DBs
Position
complement(576462..578636)
Genome browser
AA seq
724 aa
AA seq
DB search
MSVTASQKTEQWTVSASQRVSVDPLLDSLVLLTEYFGSPCSSESLAAGLPLSSSVLTPDL
VPQAAGRAGLTAKLTRKGLDQVSPIFLPCILLLKDKKACLLREIDFDKDKAVIQLPETGG
EQVLSIEDLEAIYVGYLFLVKQQYRGDMGFDLHQHDNNSHWLLQTLKDSAPIYRDALIAS
VLVNLFALVSPLFIMNVYDKVVPNLAFASLWVLAIGAGIAYIFDLIMRQLRAYLIDVAGK
KVDIIVSSKLFAKAIGIPLEKRSPSVGGMAKQLGEFDSIREILTSATITTLVDLPFAIFF
MLIIYVVAGDLAVIPLLGSIIIIGYTLIVQPKLKAAIEESNKFSSLKHGHLIESLASLES
IKSSGAEGLVQKSWQQMIGHTANWQLKAKKLSTSVTNLANFTVQLSVVCVVILGVYRVAD
NAISMGGIIAAVILSSRAISPMAQLAGLMTRGNHTASALRQLNEIMEQEDEFENKGHLVS
RQRLEGQLNADHISFCYPGSEKPVLHTMSLNIKPGERVAIIGRNGSGKSTLAKMLVGLYQ
PTKGSLRYDGLDSAQIHPTDLRRNFGYLPQDITLFHGTIRDNILFGTRQVTEHQLIRAVQ
LSGINLFTDLETEGLDQQVGEGGQALSRGQRQTVALARATLNDPPVLLMDEPTASLDARA
EKQFIRAMQNVSRDRTLLLITHKMHLLKLVDRIIVLDRGHVIADGDKEEVLDKLSKGLLA
GVQK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgtaactgcttctcagaaaactgagcaatggacagtctctgcctctcaaagagtc
tcagtcgatcccttgctagacagtttagtcctattaaccgaatatttcggtagcccatgc
tccagcgaatctctggcggcaggcctaccgctgtcctctagcgtcctgacaccagacctt
gttcctcaagcagcaggtcgtgcagggttaacagcaaagctcactcgcaaagggctagac
caagtatcacctatctttttaccttgtattttgttgcttaaagacaagaaagcttgcctg
ctcagagaaatcgatttcgataaagacaaggctgtgattcaactgccggaaacgggtggt
gaacaggtattatcaattgaggatcttgaagctatctatgttggctatctgtttttggtc
aaacagcaataccgtggcgacatgggatttgatcttcaccagcatgacaataatagtcac
tggcttttgcaaacgttgaaagactcagcccctatctaccgagatgcattaattgcctcg
gtattagttaacctgtttgcattagtgtctccccttttcatcatgaacgtttatgacaag
gtcgtacctaacctggctttcgcctctctgtgggtactcgctattggcgcaggtatagcc
tatatttttgatctaataatgcgtcaattacgcgcatatcttatcgatgttgcaggtaag
aaagttgatatcatcgtatcttctaaactctttgccaaagcgattgggatcccattagaa
aaacgctccccaagtgtcggggggatggcgaaacagctaggcgagtttgatagcataaga
gagatcttaacctctgcgaccatcaccaccttagtcgacctccccttcgctattttcttt
atgctaatcatctatgtcgtcgctggcgatctcgcggtgatccctctactgggtagcatc
atcattatcggctataccttaattgttcagccaaagctaaaagcggcgattgaggaaagt
aataagttttctagccttaagcatggccacttaattgagtcgcttgcctcattagaatca
atcaaatcgagcggtgctgagggtttggtccaaaagagttggcagcagatgataggccat
acagccaactggcaattaaaggcaaaaaaactttctacttcagtgacaaacctagctaat
tttaccgtgcaactttctgtcgtatgtgtggtgattttgggtgtttatcgagtcgcagat
aatgccatctctatggggggcattatcgcagcggttatcttatcgagccgagcgatatcg
ccaatggcacagttggctgggttaatgacccgtggtaaccatactgccagtgccctgcgt
cagctcaatgagatcatggagcaagaagatgaatttgaaaacaaaggccaccttgtcagc
cgtcagcgcctcgaaggtcaactcaacgccgaccatattagcttctgttatccaggatct
gaaaagccagttttacacactatgtcactcaatattaagcctggtgaacgtgtagcgatt
attggccgcaatggttcgggtaaaagcaccttagccaagatgcttgtaggtctctaccag
ccaactaaaggtagcctgagatatgatggactagactcggctcaaatacaccccaccgac
ttgcgtagaaattttggttatctaccacaagacatcactctgtttcatggaaccatcaga
gataatattctttttggtactcgccaagttactgaacatcaactgattagagcggttcaa
ctttccgggattaatctgtttaccgatttagaaactgaaggtctagatcagcaagtgggt
gaaggtgggcaagcgctctctcgaggacaaagacaaacagtcgctttagccagagcaaca
ttaaatgatccaccggttttattaatggatgaacctacagcgagtttggatgcccgcgcc
gaaaagcaatttattcgcgccatgcagaacgtcagtcgtgacagaaccttgctgcttatc
acccataaaatgcatcttctgaaattggttgatcgcatcatagtactagacagaggccat
gtcatcgcagatggagacaaagaagaagtgttggataagttgagtaaaggcttgctcgct
ggagtccagaaatga
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