Shewanella eurypsychrophilus: FM038_002525
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Entry
FM038_002525 CDS
T07746
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur00300
Lysine biosynthesis
seur00470
D-Amino acid metabolism
seur01100
Metabolic pathways
seur01110
Biosynthesis of secondary metabolites
seur01120
Microbial metabolism in diverse environments
seur01230
Biosynthesis of amino acids
Module
seur_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FM038_002525 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FM038_002525 (lysA)
Enzymes [BR:
seur01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FM038_002525 (lysA)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
QPG56417
UniProt:
A0ABX6V7A4
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Position
609270..610514
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AA seq
414 aa
AA seq
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MDHFLYKNNELFAEDCSVAELARIHGTPLYIYSRATLERHWYAFDRAVAEHPHLICYAVK
ANSNIAVLNVLARLGSGFDIVSGGELQRVIQAGGDPSKVVFSGVGKTVSEMEMALNLGIY
CFNVESAAELEQLNIVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKDNKFGIAMEEAEA
IFARAASLPHLKVKGVDCHIGSQLTEMQPFLDAMDRMLALVDRLAEQGIQIEHFDVGGGL
GVPYDDETPPQPDVYAAALLERLGDRDLKLIFEPGRAIAANAGIFVTQVLYLKGNGNKHF
ALVDGAMNDLIRPALYSAWQNIIPVNPRVGESLNYDIVGPVCETGDFLGKDRQLCLAAND
YLAVRSSGAYGFTMSSNYNSRPRAAELMVDGEQAHLVREREKMAQLWQGEQLLP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttggatcattttctctataaaaataatgaactgtttgctgaagattgttcagtagcagag
ttagcccgtattcatggtacacctttgtatatctactcacgcgctacgctggaacgtcat
tggtatgcatttgaccgtgcggttgctgaacatccgcatcttatctgttacgccgtaaag
gccaactccaatattgctgtcttgaatgtactcgcacgtttaggcagtggttttgatatc
gtgtctggaggtgaattacaacgggttattcaagctgggggagacccgagtaaggtggtt
ttctctggtgttggtaaaacggtatcagaaatggagatggcgctaaacttaggtatctat
tgctttaacgtcgagtctgccgcagagcttgaacagctcaacatcgttgctgggcgtcta
ggtaaagtcgctcccgtgtcgttacgtgtgaacccagatgtggacgccggtactcacccg
tatatctcaacagggcttaaagacaataaatttggtattgcgatggaagaggctgaagct
atttttgctcgagcagcttctctgccacatttaaaggttaaaggtgtcgattgccatatt
ggttcgcaactaacagagatgcagcctttcctcgatgcgatggaccgtatgttagcctta
gtggatcgtcttgctgagcaaggtattcaaatcgaacactttgatgttggtggtggttta
ggggtgccatatgatgatgaaactccgccacagccagatgtttatgccgctgcattactc
gaacgtttaggcgatagagatcttaaacttatttttgaacctggccgtgcgatagctgcg
aatgcaggcatctttgtgactcaagtactttatctgaaaggtaatggcaataaacacttt
gcgctcgttgatggagcgatgaacgatctgatccgtcctgcgctttacagtgcctggcaa
aatattattcctgttaacccacgtgttggcgaaagtctaaactacgatattgttgggcct
gtatgtgagacgggtgactttctaggaaaagaccgacagttatgcctagctgctaatgac
tatctggcggttcgttcatcaggtgcttatggttttacgatgtcatcgaactataactcg
cgtcctcgtgctgctgagttaatggtagacggtgagcaggcacatctggtccgcgaaaga
gaaaagatggctcagctatggcaaggtgagcaattactgccgtaa
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