Shewanella eurypsychrophilus: FM038_003380
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Entry
FM038_003380 CDS
T07746
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur03420
Nucleotide excision repair
seur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FM038_003380
03430 Mismatch repair
FM038_003380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seur03400
]
FM038_003380
Enzymes [BR:
seur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FM038_003380
DNA repair and recombination proteins [BR:
seur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FM038_003380
MMR (mismatch excision repair)
Other MMR factors
FM038_003380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
Viral_helicase1
AAA_30
UvrD_C_2
AAA_14
ResIII
AAA_22
NPHP3_N
AAA_11
REP_ORF2-G2P
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QPG56572
LinkDB
All DBs
Position
817818..820322
Genome browser
AA seq
834 aa
AA seq
DB search
MKNVSADTVDIDHIRIGLTLTLTDMKKLLDGDNGLGRVKTGGRKDRLTVKRINVGNVNQG
FKKGDVRPFFTARFEMFTDKDDYRNINVFLAEPQHERNKGRDLVYNCEVEFIPTRLSLPI
ISFILYQFQSVLGPRRYKQLFDKALLLELHTGYTMYGVSQLFAFMTTSDNNVKKGLCYPF
NKRQAVETTYVGDRDSHHLIGYDKTLKEIKKFVERSIKGLAGSFERVAGMLGGVDKWLPS
QVCSFRLESRQKYSKDPIALSIMPSVKSLLGKVRLLKPKYLEHLPDEQLSLLIKDKSMQP
LSAKWRSLFIKSKLKKIYLAFDTDLLNAAINKRLQALLGAILSPQKTLDVKPKENYKQAV
NNARKILGPIIDKQLHDSDPIKKIITSKSRAIYVEGCPGAGKTRLIIERIRHLREQNIKP
SAICVLAFTNKSAKEFSSRLKEEKLFSVGMVVGTFSSWCNSLLDESNKLKVLTPDSAFNV
IKSLIDKRSQIVKKHDEFEIAKCCISIFSHMANFDTPSIVRTIEKVAPDFLEFQLEVTEI
YEAYNKYKKDKYRDFNDMFVQMKRSLNDVDFLEKLAKRYKYLVIDEIQDTNGIQWHIITT
LYNNNVRLFCVGDPAQSIYGFRGAVRYMTAKFEKQFEGGVRFQLTRNYRSTKPLVKLTND
LRFKIDTNSIGSVSVLKESKKSSELAKIKFCDTLKKATTWLIKDLEINHNSYACQLILCR
YNKQVKSIEKALAVVGSDFAERLSLQVMTFHKAKGLQAEHCYVIDPLFSVSQLSTYKEEL
CNTYVAFTRAEKALTILACETGTTVYGLGSKSAGRKKAKSIFLDMPEQWVEIIG
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgtgagtgcagatactgttgatatagaccatatccgtataggcttgactctt
acattaactgacatgaagaagctactagatggtgataatggtttagggcgagttaaaaca
ggtggtagaaaagacaggttaacagtaaagagaattaacgttggtaatgttaaccaaggc
tttaaaaaaggagatgttcgtccattttttactgctaggtttgaaatgtttaccgataaa
gatgactatcgcaatattaatgtctttttagctgagcctcagcatgagcgcaataaaggg
cgagatttagtctataactgtgaagttgagtttattcctactcgtctaagcctgcccatc
atttcttttatcttatatcaatttcaatcggtgttaggtcctcgccgctataaacagcta
ttcgataaggctctactgctagagttgcatactggctatacaatgtatggtgtatctcag
ctattcgcttttatgaccacgagtgataacaatgttaagaagggcttgtgttaccccttt
aataagcggcaggcagttgaaactacttatgtaggtgatagggacagtcatcatctgatt
ggatatgacaaaacgctcaaagagatcaagaaatttgtagagcgttccattaaggggttg
gcgggctcatttgagcgtgttgctggcatgttaggtggcgttgataagtggctaccttcg
caagtgtgcagtttccgtcttgagtcgcgtcaaaagtatagtaaagatccgattgcatta
agtattatgccgtcagttaaatccttacttggtaaggttcgattattgaaacccaagtac
cttgagcatcttccagatgagcaactaagcttgttaattaaagataagtcaatgcagcca
ttatcggctaaatggcgctctctgtttattaagagtaaactcaaaaaaatctatctagct
tttgataccgatctacttaatgcagcaattaataaacggttacaagcgttgttaggagcc
attttaagtcctcagaaaactctagatgtaaaacctaaggaaaactataagcaagcagtc
aataatgctcgtaagatattgggtcctattattgataagcagctacatgacagtgatccg
atcaaaaaaatcataacttctaagagtcgagctatttatgttgaaggctgccctggagcg
ggtaaaacacggcttattatagagcgtattagacatcttcgtgagcaaaatattaagccc
agtgctatctgcgtattagcctttactaataaatctgctaaagagttttcatctcggctc
aaagaagaaaagctattttcagttggtatggttgttggtacgttcagtagttggtgcaat
agccttctagatgaaagtaataaactaaaggtgcttactccggatagtgctttcaatgtt
attaagtcccttatcgataagcgaagtcaaattgttaaaaagcatgatgagttcgagatt
gctaaatgttgtatttcaatatttagtcatatggcaaattttgatactccaagtattgtg
cggactattgagaaagttgctcctgactttcttgagtttcaacttgaggttaccgagata
tatgaggcttacaataagtataaaaaagataagtatcgtgatttcaatgatatgttcgta
caaatgaaacgaagcttgaatgatgtagactttctggaaaaacttgctaagcgatataag
tatttggttattgacgagattcaagatactaatggcatccagtggcatatcattactact
ttatataacaataacgtgcggttattttgcgtaggggatcctgctcaatctatatatggt
ttccgtggtgctgttcgctatatgacagccaaatttgagaagcaatttgagggtggggta
aggttccagctcacacgtaactatagatcgactaagcccctcgttaagctaacaaatgat
cttaggtttaaaatcgatacaaactctattggctcagtaagcgtattaaaagaaagcaag
aaaagtagtgaactcgcaaagataaagttctgcgatactttaaaaaaggctactacatgg
ctaatcaaggatttagaaattaatcacaacagctatgcctgtcagcttattttgtgccgt
tacaacaagcaggtaaaaagcatcgaaaaagcattggcagtagtggggagtgattttgct
gagagactgtcgttgcaggtaatgactttccataaagcgaaaggcttacaggctgaacat
tgctatgtaatcgatcccttatttagtgtgagccagctttcgacatataaagaagagtta
tgtaatacctatgttgcttttacccgtgcagaaaaggcattgacgatacttgcctgtgaa
actggcactacagtttatggtttaggctctaaatcggcagggaggaaaaaagcgaagagt
atcttccttgatatgcctgaacaatgggttgagattatagggtga
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