Shewanella eurypsychrophilus: FM038_003730
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Entry
FM038_003730 CDS
T07746
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
seur
Shewanella eurypsychrophilus
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
seur03009
]
FM038_003730
Enzymes [BR:
seur01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
FM038_003730
Ribosome biogenesis [BR:
seur03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
FM038_003730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QPG56636
UniProt:
A0ABX6V1Y6
LinkDB
All DBs
Position
complement(905093..905845)
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AA seq
250 aa
AA seq
DB search
MTQNTTPIRLAKYLAMTGLCSRRAVTRYIRDGHITIDGRLANHIDTVTLVECEMGISSQE
TLKFDGVLIQGVESKQYWMLNKSVGTDCRLLTDDPSSLLHLLPASPRLYPVGRLDKDSRG
QLILTNDGELTQKLMHPDFGHSKTYYVQVDRDFDDTFLIKMAQGVSYRDVTTLPCKMTRL
ASDKFEIVLTQGLNRQIRRMSQTLGYKVVDLKRVSIQTLALGELSEGEMRQLSGSELSLL
IDSCRPSNEG
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaaacaccactcccattcgtttggccaaatatctcgccatgactggactctgt
tcccgtcgggccgtgactcgctatattcgagacggtcatatcaccatagatggccgcctc
gccaaccatatcgatacagttacactcgtcgagtgtgaaatgggcattagtagccaagaa
acactcaaattcgatggtgtacttattcagggagtcgagtctaagcagtactggatgctc
aacaagtctgtcggtacagactgccggctattaaccgatgaccccagctctttactacat
ctcctgccagctagccccagactctatcctgtgggccgtttagataaagactcccgtgga
cagttgatactcactaacgatggtgagttgactcagaaactcatgcacccagattttggc
catagcaagacctactatgtacaagttgatcgcgacttcgatgacactttcttaatcaaa
atggcccaaggggttagctaccgagatgtcaccaccctgccctgcaagatgacacgactt
gctagcgacaagtttgagatcgtactcacccaagggctgaaccgacagatccgccgtatg
agccaaactttaggctataaggttgtcgaccttaaacgagtgagtattcaaaccttggcg
cttggtgagcttagtgaaggtgagatgaggcaactctctggttcagagctatctcttctc
atagatagttgccgaccttcgaatgaaggttaa
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