Shewanella eurypsychrophilus: FM038_004170
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Entry
FM038_004170 CDS
T07746
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FM038_004170 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
seur01007
]
FM038_004170 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seur03016
]
FM038_004170 (lysS)
Enzymes [BR:
seur01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
FM038_004170 (lysS)
Amino acid related enzymes [BR:
seur01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FM038_004170 (lysS)
Transfer RNA biogenesis [BR:
seur03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FM038_004170 (lysS)
Prokaryotic type
Other AARSs
FM038_004170 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QPG56713
LinkDB
All DBs
Position
1012514..1014016
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AA seq
500 aa
AA seq
DB search
MTEQVQDENKLIAERRAKLEHIRANCPANGHPNNFDRKHKAADIQAEYGNHTKEELEGMD
IQRSIAGRVMAKRGPFLVIQDVSGRIQAYAGKDVQKDLKATFQGLDIGDIIGVTGKLHLS
GKGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRAAFIMRSKVV
SSIRNFMIKKEFMEVETPMMHTIPGGATARPFITHHNALDIEMYLRVAPELYLKRLVVGG
FERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIAIELCGSPQL
PYGEHTVDFGGPYARLSMLDAIKKYNPDNETIQSMTYEEVKDVEFMRNLAKSIGMTIEKF
WTCGQLLEEIFGETAEPQLMQPTFITGYPADISPLARRNDENHFITDRFEFFIGGREVAN
GFSELNDAEDQDQRFKAQVAAKDAGDDEAMFYDADYIRALEHGLPPTAGQGIGIDRLVML
FTNTHTIRDVILFPAMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaagtacaagacgaaaacaagttaattgcagagcgccgcgccaagcttgag
catatacgcgccaactgcccagccaatggtcacccaaacaacttcgatcgtaaacataaa
gcggctgatattcaggctgaatatggtaaccacactaaagaagagctcgaaggcatggat
atccagcgttctattgctggtcgtgtgatggctaaacgtggtccattcttagtgattcaa
gacgtcagcggtcgtattcaagcttatgcgggtaaagacgttcaaaaagatctaaaggcg
acattccaaggcctggatatcggtgacattatcggtgtgacgggtaagctacacctttca
ggaaaaggcgacctttacgtcaatatggaagagtatcagctgctgactaaagcgctgcgt
ccactgcctgagaagttccacggtcttactgaccaagaaacgcgttaccgccagcgttat
gttgatcttatcgttaacgaagagtctcgcgctgcctttatcatgcgctctaaagtggtt
tcttctatccgtaacttcatgatcaaaaaagagttcatggaagttgaaacgccgatgatg
cacaccatcccaggcggtgcgactgcacgtccgtttattactcatcacaacgcactggat
atcgagatgtatctgcgtgttgcacctgagctttatcttaagcgtttggtcgttggtggc
ttcgagcgtgtgttcgagattaaccgtaacttccgtaacgaaggcttatcgcctcgccat
aacccagaattcactatgatggaattctatatggcctacgcagattataaagatctgatg
gacttaaccgaagagatgctcagctctatcgccatcgagctttgtggttctccacagctt
ccatatggtgagcatacggtagatttcggcggcccatatgcccgtctaagcatgctagat
gctattaagaagtataatcctgacaacgaaacgattcagtctatgacttatgaagaagtt
aaagacgtcgagtttatgcgtaacttagctaagagcattggcatgacaatcgagaagttc
tggacttgtggtcaactgcttgaagagatcttcggtgaaaccgcagaacctcagttgatg
caaccgacatttattaccggttaccctgcagatatctcgccattggcacgtcgtaacgat
gaaaatcatttcatcaccgaccgcttcgaattctttatcggtggccgtgaagtggccaac
ggtttctctgagcttaacgatgctgaagatcaagatcagcgtttcaaggctcaggttgct
gcgaaggatgccggtgatgacgaagccatgttctatgacgctgactatatccgcgcgctt
gagcacggcttaccgccaacagcgggtcaaggtatcggaatcgatcgtttggtgatgttg
tttaccaatacgcacacgatccgtgacgttatcctgttcccagcgatgcgtccacaggct
taa
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