KEGG   Shewanella eurypsychrophilus: FM038_005445
Entry
FM038_005445      CDS       T07746                                 
Name
(GenBank) AAA family ATPase
  KO
K02450  general secretion pathway protein A
Organism
seur  Shewanella eurypsychrophilus
Brite
KEGG Orthology (KO) [BR:seur00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:seur02044]
    FM038_005445
Secretion system [BR:seur02044]
 Type II secretion system
  General secretion pathway protein
   FM038_005445
SSDB
Motif
Pfam: AAA_22 AAA_16 PG_binding_1 SLFN-g3_helicase AAA_14 AAA_5 AAA_19 AAA AAA_30 Sigma54_activ_2 nSTAND3 AAA_7 Mg_chelatase ABC_tran TrwB_AAD_bind TsaE TniB Sigma54_activat ATPase_2 AAA_18 cobW Peptidase_C39 AAA_33 AAA_11 AAA_25 CLP1_P AAA_24 GspA_C39-like NTPase_1
Other DBs
NCBI-ProteinID: QPG56940
LinkDB
Position
1295571..1297199
AA seq 542 aa
MYKAFFGLSDNPFSIAPNPHYLFLSDRHREALAHLTYGLGETGGFVLLTGEVGTGKTTVS
RCLLNQLPENTDTAFILNPSLTEQELLATLCDELKIVYEKDPSLKQLTDLLSQFLLANHS
KGRNTVLIIDEAQHLRPEVLEQLRLLTNLETDTKKLLQVILIGQPELQQLLRRQELRQLA
QRITARYHLLPLTLEEVGLYVQHRLQVGGRHEPLFNRAAIKTLHKFSGGIPRLINLLCER
ALMAGYAQSKVPIDRKMVNSAAAEVLGEDIKQRSYLLPIVAASALALSGVLAFMLFTNTN
GSTQGEFALTSSVNSTTAKSELVPSPVKKDRDAVSSSSQRVLNEAIKQSRDIDTAYASIL
GLWDKVPYIGLSACQSAEQQGLSCFQQQGNWNSLIRLNFPAIVYLIDSQQQAFYGTLVSR
HGEQLLLQLNEQQLWVDRDWFTRHFSGTFEILWQQPSSQPREIGKGSSAEQIQWLENSLA
EIDNSSPRLVDNFDARLERKLMLFQRQHGLRADAIAGSQTLVQLNLYLSAEGPRLVEGKR
NY
NT seq 1629 nt   +upstreamnt  +downstreamnt
atgtacaaggcgttttttggattgagcgataaccctttctctatcgcaccgaaccctcat
tatctatttctcagcgataggcaccgtgaagcattagctcatttgacctatggattaggt
gaaacgggtggctttgtattgttaaccggtgaggtaggcacaggtaaaaccactgtgtct
cgttgtttacttaaccaattacctgaaaacaccgatacggcgtttattctcaatccatca
cttactgagcaggagctgctggccactctgtgtgatgagttgaaaattgtttatgaaaaa
gacccaagtctaaagcaactgacagaccttttgagtcagtttttactagccaaccatagt
aagggccgaaacaccgtgctcatcattgatgaagctcagcaccttagacctgaagtactc
gagcagttacgtttactgactaaccttgaaaccgatactaagaaactcttgcaggtgatc
ctaattggtcagcctgaattacaacagttgttgagaaggcaagagttacggcaactggct
caaagaattactgcgcgatatcatttattgcctctgacgcttgaggaggttggcttgtat
gttcagcatcgacttcaagtcggcggccgccatgagccgctatttaatcgcgccgcaatt
aaaaccttacataaatttagtggtgggatcccaagattgattaacttgctctgtgagcga
gcgttaatggcaggctatgcccaatctaaagtgccgattgatcgtaaaatggttaactca
gcagctgccgaagtcttaggtgaagacattaaacagcgcagctatttattaccaatagtt
gcggcttctgcgctcgcgctaagtggtgtattagccttcatgttatttactaatacaaac
gggtcaacacaaggtgagtttgccttaacgtcctcagtaaattcgactacggctaaaagc
gaacttgtgccgtcacctgtaaaaaaagatcgcgatgctgtttcgagttcgagtcaaaga
gtacttaatgaggcgattaaacaaagtcgtgatattgataccgcctatgcaagcatttta
gggctttgggataaggtgccatacattggactctctgcgtgccaatcggcggagcaacaa
ggcctttcttgtttccaacaacagggaaactggaattcactcatacgcttaaattttcca
gctatcgtttaccttatcgatagtcagcaacaagctttttatggcacgctagtttcacgc
catggtgaacagttattactgcagcttaacgaacagcaactttgggttgatagagactgg
tttacacgccactttagtggcacgtttgagatcctttggcagcagccgagcagccagcca
agagaaattggcaagggctcaagtgctgaacagatccaatggttagaaaacagtttagct
gagatagataactcgtcgccaaggctcgtcgataattttgatgcaagactagagcgcaag
ctgatgctgtttcagcgtcaacatggtttaagagccgatgctattgccggcagtcagaca
ttagtacagcttaacctttatttgagcgcagaaggtccgagattggttgaagggaaaagg
aattactga

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