Shewanella eurypsychrophilus: FM038_005970
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Entry
FM038_005970 CDS
T07746
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur02024
Quorum sensing
seur03060
Protein export
seur03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
FM038_005970 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FM038_005970 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FM038_005970 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
seur02044
]
FM038_005970 (ffh)
Enzymes [BR:
seur01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
FM038_005970 (ffh)
Secretion system [BR:
seur02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
FM038_005970 (ffh)
Eukaryotic Sec-SRP protein
FM038_005970 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
cobW
AAA_33
FliD_C
AAA_24
YqeC
KTI12
AAA_30
AAA_31
APS_kinase
AAA_14
ArsA_ATPase
TsaE
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QPG60364
UniProt:
A0ABX6VF38
LinkDB
All DBs
Position
1415945..1417318
Genome browser
AA seq
457 aa
AA seq
DB search
MFENLTDRLSRSLKNISGRGRLTEDNVKETLREVRMALLEADVALPVVRAFVNSVKERAV
GQEVSKSLSPGQAFIKIVQSELENAMGEANEGLDLSAQPPAVIMMAGLQGAGKTTSVAKL
GKFLREREKKSVLVVSADVYRPAAIKQLETLAIEVDVQFFPSDVSQKPVDIVNAAIAHAK
LKFIDVVIVDTAGRLHVDESMMDEIKALHAAANPVETLFVVDAMTGQDAANTAKSFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEAFHPDRVASRILGMGDV
LSLIEEVERGVDKDKAMKLAAKVKKGGSFDLEDFREQLSQMKNMGGMMGMIEKLPGVGQL
PPEALAQVQSGKMTNQMEAIISSMTPGERKRPDIIKGSRKRRIAAGSGTQIQDVNRLLKQ
FTQMQKMMKKMSAKGGMKKMMRGMSGMLPPGMKMPGR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaacttaacggacagattgtcacgctcgctgaaaaacatcagtggtcgtggt
cgcttaacagaagataatgttaaggaaacgcttagagaagtgcgtatggcactgcttgag
gccgatgtcgctttacctgttgtacgagccttcgtcaacagtgtaaaagagcgtgcagtg
ggtcaggaagtctctaaaagtttaagtcccggtcaagcatttattaagatagttcagagt
gaacttgaaaatgccatgggcgaagccaatgaagggcttgacctttcggctcagccgcca
gccgttatcatgatggcgggtttgcaaggtgcaggtaaaaccaccagtgttgctaaactg
ggtaagtttctgcgcgagcgagagaaaaaatctgttctagttgtgagcgccgatgtttat
cgtcctgcggcgattaagcagctagaaaccttggctatcgaagtcgatgtacaatttttc
ccatcagatgttagtcaaaaaccagtcgatatcgttaatgcggctatagcacatgccaag
cttaagtttatcgatgtggtgatagtcgatactgcaggccgtttgcacgtcgatgaaagc
atgatggatgagataaaggcgctgcacgctgcggctaaccctgtcgaaaccctgtttgtt
gttgacgccatgacgggtcaagatgcggctaacacagcaaaatctttcaatgaagctctg
cctctgaccggtgtggtgctaaccaaggtcgatggtgatgcccgaggcggtgcagcatta
tctatccgtcatattacaggtaagccaattaagttcttaggtgtcggtgaaaagaccgac
gcattagaagctttccatccagatcgtgtagcatcacgtattctaggtatgggcgatgta
ctgtcactgattgaagaagtagaacgcggcgtcgataaagacaaggcgatgaagctcgca
gctaaagtgaagaagggcggcagcttcgaccttgaagatttccgtgaacagctgagtcaa
atgaaaaatatgggcggcatgatgggcatgattgaaaaattgcctggtgttggccagttg
ccacccgaagcgttagctcaagtacaaagtggcaaaatgacgaatcaaatggaagccatc
attagctcgatgacacccggtgagcgtaaacgcccagatatcattaaggggtcacgtaag
cgtagaattgcggcgggatctggaacgcaaatccaagatgtgaaccgtctactaaagcag
ttcactcagatgcagaagatgatgaagaagatgtcagctaaaggcggcatgaaaaagatg
atgcgtggcatgagtggtatgttacctcctggaatgaagatgccgggtcgttag
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