Shewanella eurypsychrophilus: FM038_008040
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Entry
FM038_008040 CDS
T07746
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
seur
Shewanella eurypsychrophilus
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seur03400
]
FM038_008040
DNA repair and recombination proteins [BR:
seur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FM038_008040
Archaeal homologous recombinant proteins
FM038_008040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QPG57393
LinkDB
All DBs
Position
1907992..1909137
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AA seq
381 aa
AA seq
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MKFIHTSDWHIGRQLHNQSLLDDQRFVLNQIVELAVLHDVDALIVAGDIYDRSIPPASAV
ALLDEVVNRVVNELKIPIIMIAGNHDGHERLGFASRQMIDSGLHIVGPLTKTVTSIELKG
KQGSAMFYGLPYADPATVRHVLDCEVSTHEAAMDKLLEQVHEHDSNGLPKVVISHCFLDG
GSESESERPLSIGGADKISPKLFTPFNYTALGHLHGPQYKGSDHVRYSGSMLKYSFSEQH
QNKSVTLVELDSEGKAHFELLPLSAMRDVRIIEGKLAELLKIGKTDVNREDYLMVRLSDK
TAILDAMGKLRSVYPNVLHLERTGLMSDNGKVELSRDHIKKGEMDMFSDFFTQVSGDAMT
EAQQQAMTAAIDELHKLERTS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatccatacttctgactggcatattggcaggcaacttcataatcagagcctg
cttgacgaccagcgcttcgttcttaatcagattgtcgagcttgcagtcctgcatgatgtc
gatgcgctgattgtcgcaggtgatatttacgacagatccattccgccagcgagtgccgtg
gccctgcttgatgaggtggtcaatcgtgtggtgaatgaacttaagatccccataataatg
atcgccggtaatcatgatggtcatgaacgtttgggctttgcgtcgagacagatgatcgat
agcggcttgcacatagtcggcccgttaacaaaaacggttacatctattgagcttaaaggt
aagcagggcagtgcgatgttttatggtctgccctatgccgatcctgccactgtgcgtcac
gtattggattgtgaggtgagtactcatgaagccgcgatggataaattgctggaacaggtg
catgaacacgacagcaatggtttacctaaagtggtgatcagccattgttttctcgatggg
ggcagcgagtctgagtccgaacgtcctctgagtattggcggcgccgataaaatatcaccc
aaactatttacgccctttaactatacggcgctgggtcaccttcatgggccgcagtacaaa
ggcagcgatcatgtcaggtattcaggctctatgctcaaatactcttttagtgagcagcat
cagaataagtcagtgactttagttgagttagatagtgaagggaaagctcactttgagttg
ctgccattatcagccatgagagatgtgcgcattatagaaggcaagttggccgaattactt
aaaatcggtaaaaccgatgttaatcgtgaagattatctgatggtgagattgagtgataag
acagctattttagatgccatgggcaagctcagaagcgtgtatcccaatgtgctgcattta
gagcgtactggcttgatgagtgataacggcaaggttgaactgagccgggatcatatcaag
aagggtgagatggatatgtttagtgacttcttcactcaagtgtccggtgatgcgatgaca
gaggcgcagcaacaagcgatgacagcagccatcgatgagctacataagttggagcgcaca
tcatga
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