Shewanella eurypsychrophilus: FM038_008120
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Entry
FM038_008120 CDS
T07746
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur00230
Purine metabolism
seur00240
Pyrimidine metabolism
seur01100
Metabolic pathways
seur01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
FM038_008120 (nrdD)
00240 Pyrimidine metabolism
FM038_008120 (nrdD)
Enzymes [BR:
seur01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
FM038_008120 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Zn_Tnp_IS91
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QPG57407
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Position
1928183..1930300
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AA seq
705 aa
AA seq
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MPVVIKRDGYRTPFDETRIRDAVSAAANSAGIDDKAYAAQVANVIASSVSMREEIDIHDL
QDLVENQLMEGPYKSLARVYIEYRHDRDLHRETSSRLNQEIRGLVEQSNAALMNENANKD
SKVIPTQRDLLAGIVAKHYATRHILPKDVVAAHEAGEIHYHDLDYAPFFPMFNCMLIDLS
GMLTQGFKMGNAEIETPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVAKSYD
KQYQLALDWGITDAKAFATAQTEKECHDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSW
ESRLIQASMMKVRIAGLGKNRKTAVFPKLVFAIRDGINHKVGDCNYDIKKLALKCASTRM
YPDILNYEQVEKVTGSFKTPMGCRSFLGTYEEEGELVHEGRNNLGVVSLNLPRVALESGG
DEAEFYRILDQRLVIARKALDTRIERLEGVKARVAPILYMEGACGVRLRADEEISTIFKN
GRASISLGYIGLHETINALYGTDKHVYDSELLREKAIAIIEYMKAATLKWKEETGYAFSL
YSTPSENLCSRFCHIDTKRFGVVKGVTQKGYYTNSFHLDVEKQVNPYDKLDFEQPYPALT
NGGFICYGEYPNMQNNLEALEDVWDYSYSRVPYYGTNTPIDECYDCGYTGEFECASKGFT
CPKCGNHEPSRVSVTRRVCGYLGSPDARPFNFGKQEEVKRRVKHL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggttattaagcgggatggttaccgcacgccttttgacgaaacaaggattaga
gatgcagtatcagctgcagctaactcggcaggtattgatgataaagcctatgcggcccag
gtcgcgaatgtaattgcgagcagtgtgtctatgcgtgaagagatagatattcacgatcta
caagacctcgttgaaaatcagctgatggaagggccttataaatcccttgcacgtgtttat
atcgagtatcgccatgacagagatctgcatcgtgaaacgagcagtcgattaaaccaagag
atccgtggcttagttgagcaaagtaatgctgctttaatgaacgaaaatgccaataaagat
tccaaagtgatcccaactcaaagggatctgctcgcgggtattgtggccaaacattatgcc
actcgacatattctgccaaaagatgtggtcgcggcacatgaggctggcgaaattcattac
catgatctggattacgcacctttcttccctatgttcaactgtatgctgatcgatctcagt
ggcatgctgactcaagggtttaagatgggtaatgccgagattgagacgcctaagtctatc
tcgacagcgaccgcagtaacggctcaaatcattgcgcaagtcgccagtcatatctatggc
ggcacgactatcaacagaattgacgaagtcctcgcaccattcgtagctaagagctatgac
aagcaatatcagttagcactggactggggcattaccgatgctaaagcgtttgcaacggct
cagacagaaaaagagtgtcatgatgctttccagtcgttggaatatgaggtcaacacctta
cataccgcaaacggccagacaccgtttgttaccttcggttttggtttaggcacttcatgg
gagtctcgactcattcaagcgtcgatgatgaaggtgcgtattgcaggtctaggtaagaac
cgtaagacggcagttttccctaaattggtatttgctattcgtgatggcatcaaccacaag
gttggcgattgcaattatgatatcaaaaagttagccctaaagtgtgcctctactcgcatg
tacccagacattcttaactacgagcaagtggaaaaggtgacgggatcatttaagacccct
atggggtgtcgaagcttcttgggaacctatgaagaagagggtgagttagtccatgaagga
cgtaacaatttaggcgtagtcagcctcaacttaccaagagttgcgctagagtcaggcggt
gatgaagctgagttttatcgtattttagatcaacgcttagtgattgcgcgtaaggcatta
gatacccgtattgagcgtttggaaggggttaaagcccgtgtcgctcctattttatatatg
gaaggggcttgtggggtaagattgcgcgccgatgaagagatctcaaccatctttaaaaat
ggccgtgcctcgatttctcttggatatattggtttacatgaaaccattaatgcgctttat
ggcactgacaagcatgtctatgacagtgagctattaagagaaaaggcgatagctatcatt
gagtacatgaaagctgcaaccttgaagtggaaagaagagactggctatgcgtttagctta
tacagcacgccgagtgaaaacttatgtagtcgtttctgtcacatagatactaaacgtttt
ggcgtggttaaaggggttactcaaaaaggttattacaccaatagcttccatcttgatgta
gagaagcaagtgaatccctacgacaagttggattttgagcagccatatcctgcattaacc
aatggtggctttatttgttacggagagtatccgaatatgcagaataatcttgaagcctta
gaggatgtgtgggactacagctacagtcgcgtgccatattacggcaccaatacaccgatt
gatgagtgttatgactgtggttataccggcgaattcgaatgtgccagtaaagggtttacc
tgtcctaagtgtggcaatcatgagccaagccgagtctcagtaacccgtcgagtatgtgga
tacctaggtagcccagatgcgagaccatttaactttggcaagcaagaagaagttaagcga
cgggttaaacacttataa
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